Musca domestica (house fly): 101887992
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Entry
101887992 CDS
T03448
Name
(RefSeq) probable helicase with zinc finger domain isoform X1
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
mde
Musca domestica (house fly)
Brite
KEGG Orthology (KO) [BR:
mde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mde03019
]
101887992
Messenger RNA biogenesis [BR:
mde03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
101887992
3'-5' decay
Other 3'-5' decay factors
101887992
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
ResIII
AAA_30
AAA_19
zf-CCCH
UvrD-helicase
PAM2
PhoH
AAA_22
zf-C2H2_jaz
AAA_14
zf-C2H2_4
AAA_7
zf-C2H2_2
Mov-10_helical
AAA_5
Motif
Other DBs
NCBI-GeneID:
101887992
NCBI-ProteinID:
XP_005175912
UniProt:
A0A1I8M4I4
LinkDB
All DBs
Position
Unknown
AA seq
2270 aa
AA seq
DB search
MKNNSTNLMAIMTDKEKQAHDLVRCRNWLRAATLYDEILASAPTWNRVQKDRHIICLLGR
CECLYELGKYEPCLADARKLLSMISEQQPADCLTSVSRTRKWQIHALCKLKKYVEAEKTL
KEWIAQFRFRKFNEICNVLEGYRLVVNMLYSYDKSEQKLMDLAFLDDKMASLDNKLDNWA
SKSLALDKYSKHLCGAGGGVGATGATGSNTNIKGIKKRENPTPNGGGPLNNMSGLMLASL
GVSSASSNKTATADDAAATSEDANSTTCSYCAITFSSRNELRQHCQTEAHQNVIMSDEGR
DWKWRPPPRGFTLDSYSLCESWTESQLCHYGNQCVEAHGQDELNEWKERFEYRRMRLQKA
CEKELYGKSYTEQILEKWIQSTAPEKIMCEKVDGIEANCEQDLVTSISSKTSKREWVFVL
KTTGKTLKAVALLQDAHRSHFALKSIKTPDTTYELDAKTNQEWMPQKLSTSSSSTSTSSS
EKEESKKSTTDSNAESSSSSSSTCTTNSTPVEHHVTVEFHTEIYGTFRQAVCFDFGSEPI
LVRHLCVDVVPVSDAEKIEEIKRDIINSSATRWDVSNTHLVKFETTIGTHMKTEGYLNDL
KHEKEMLERYPCPRAQTFTLTQSTILDKRLTQNNYRSRIHELLYVEEIARYEQIARFNLR
TKLNVTSNYILTPAGMATSTAKYSLSGELFALMHLGKDVSEDTSAGRLILSNCSSVYISV
VDEANLGVDKKRHVYEAVIEDKGKNVIYLKLSSKCVEALKLKADTELHVDIQFQLNRLPY
CEWHHAVDKITDFKIIFPATEVEPNIPWTPKKQWSESCEPKLNAKQREAVNAITTTLSIK
LPPILLIGPFGTGKTYTLAQAIKQLLTQPEAKILICTHSNSAADLYIKEYLHPWIEAGLE
EATPLRVYYHKRWVATVNSVVQKYCITDGAGNFRRPTVEDIMKHRIVVVTLSISMELANL
DLPKGYFTHIFLDEAAQAMECEAIMPLALANDSTRIVLAGDHMQMSPELFSAFAKERKLH
ISLLERLYDHYPSNFPCKILLCENYRAHEAIIKFTSELFYEQKLIASGKQPRHEKFYPLT
FFTTRGEDVQDKNSTAFYNNSEVYEVVERVSELRKKWPSSWGKINDASIGIMTPYADQVF
RIRSELRKRRMGGISVERVLNVQGKQFRAIFLSTVRTRRTCLPIAGGSGVGGTAGGGGFP
GQSSSPSEDADYGFLSNSKLLNTAITRAQSLVAVVGDPVALCSIGRCRKVWERFIEICDE
NKSLFGITMWQLRSQLDGVELKRGYVLNPLAPEFIPRSLQPEAYLRDQAAMYYAMAANNH
HPMGPHPGHHHGPGGMGPHPSLLPGGGSGQIPPHHAAAMANQQMPHMYGPHSAAAAAYNA
AAAAAAVMMNQGMVGGKGGHHFHGHPNHMPMRAIGPPPAGGPQQPPQSAPPMSGQQFNPR
GPPPPPVHLGQPPPNGAGGNQFSQYMPWQHAQQQQLRPPGSGGNFGSAPGQQSGVPTGQN
PNASLWGPPPQSNPWTVLPKQQQMQQPPNPNGANGRQMGSQQTGQNMRGQSVPLQPPPLS
NQQQMRNNPNDLGYLANKALYAGKQHPGQGAQVPPTQVHSNFGGFGGQGNAPPPPPNQLQ
MMNQRNMSGIPNGPISPMDPFMPRPPAAGGAAPNQNAAFFGQNNLPGPMKDKDFQFLNNV
HVPLNIGGTMFQAPPPPPNAMVGSANKQQSPTALRFPQPHEYASLLPPNMNIYEMAFEPK
ESQYKWYLKLLETQGQDAANKFTEVLRQVSTMMQQQQPQPQQPVNKPPQHLQQTYMNNMG
VQPQPPTQQQQQQLMPRDASFMQPLMSYQQQQPPQQQQQPPQRNVNPFMGPLPPPSNPMP
SNVGLNDETPPLDINFNQQIDMVFNSILNGNEISQPILRDLFGVAGGSSSNNAGPSAMNG
GDMILNSNSSSSNNLLGGSKIFPNIGTGGSSANGVGGGGGPAVMNNHQGNMAKNTMGPNC
MLGGMPPQQQGAANPPSGFMGNNSLLNNKEFMLGPNISGGGAGSTSSNSSSVPLYRRQGL
TMGNGHNLNSAGNSSASTSGHSLSSSTPDNILNSSPNDILAGLSTGSNTLIEALFQDQHQ
QQNNATLQKLLYNNFNASGLKGGVGGGDMDLFMGNNSFVNALTDGVANSFHAPNYEQTSA
NSVNSSGGNNIIGGPNTTATGAAGDGRNTTYAAVLSQGPQAQEALQHHNYAHNAALTTGP
GGAAGLVGNGLAGLGLNVNNSANGDGGDKDPFAAIRELGQGTNGFYNYFQ
NT seq
6813 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacaactcgacaaatctcatggctatcatgacggacaaagagaagcaggctcac
gatttggtgcgttgccgcaattggttacgtgctgccacattatatgatgagatcttggct
tcggcaccaacatggaatcgtgtacaaaaagatcgtcatattatctgcctgctgggacgt
tgcgagtgtctgtatgagctaggcaaatatgaaccttgtctggctgatgcccgcaaactg
ttatccatgattagtgaacaacaacctgctgactgtttgaccagtgtgtcgcgaacgaga
aaatggcaaatacatgctttatgtaaactcaaaaaatatgtggaagccgaaaaaactctc
aaagaatggattgcacaatttcgttttcgtaaattcaatgaaatttgcaatgtgttggag
ggttaccgacttgttgttaatatgttgtacagctatgataaatccgaacaaaagttaatg
gatttagcctttttagatgataaaatggccagtctggataataaacttgataactgggct
agcaaaagtctggctctagacaaatacagtaaacatttatgtggtgctggtggaggagtg
ggtgccacaggtgccactggtagtaataccaacatcaaaggtattaagaaacgtgaaaat
ccaacaccaaatggtggtggacctctcaataatatgtctggtctcatgttggcatcactt
ggtgtcagttccgctagcagcaataaaacagcaacagccgatgatgcggcggcaacatca
gaagatgccaacagcacaacttgttcgtattgtgcgattacattcagtagccgaaatgaa
ttgcgccaacactgtcaaaccgaagcccatcagaatgtcattatgtcagatgagggcaga
gattggaaatggcgaccaccgcccagaggctttaccctggactcctacagcctttgtgag
tcgtggacagaatcacagctttgccactacggcaatcagtgtgtagaagcccatggtcaa
gatgaacttaacgaatggaaggagcgtttcgaatataggcgcatgcggctgcagaaagct
tgtgaaaaagaattgtacggcaaatcgtataccgaacaaatcttagagaaatggatacaa
tccaccgcacccgaaaagatcatgtgcgaaaaggttgatggcatagaagcaaattgtgaa
caagacttggttacgagcataagctccaaaacatcaaagcgcgaatgggttttcgtatta
aaaacaaccggtaagaccttaaaagccgttgccctgctacaggatgctcatcgtagtcat
ttcgcattgaaaagcataaaaacaccagatacaacctatgaattggatgcaaaaacaaac
caggaatggatgccacaaaaattatctacatcatcgtcatcaacatccacctcatcttcg
gaaaaggaggaatctaagaagtccaccactgatagtaacgctgagtcgtcttcgtcatca
tcctctacatgtacaaccaacagtacaccagttgaacatcatgtcacggtcgaattccac
actgaaatctatggcacatttcgtcaggcagtttgtttcgattttggttcagagccaata
ctggtgcgacatctctgtgtggatgtagtcccagtaagtgatgcggagaaaatcgaggaa
atcaaacgtgatataatcaatagttcggccaccagatgggatgtatccaatacacacctg
gtgaaattcgaaactaccattggtacccacatgaagactgaaggctatctcaatgactta
aagcatgagaaagaaatgctcgagcgttatccctgtcccagagcgcaaacatttaccctg
acacagtcgacaatactggataaacgtttgacgcagaacaattatcgttcccgtatccat
gagttgctgtacgtcgaggaaattgctcgctacgaacaaattgcgcgcttcaatttgcgc
acaaaactgaacgttacatccaattacatacttactccggcaggcatggccacaagtacg
gcaaagtattcgctatcgggtgagctgtttgctctaatgcatttgggcaaagacgtttca
gaggatacgtcggcaggtcgtttaattctatccaattgttccagtgtgtatatatctgtt
gtagatgaagcgaatctcggcgtcgataagaaacgccatgtgtacgaggctgttattgaa
gacaagggcaagaatgtgatctacttaaaattatcgtctaaatgtgtggaggccctgaaa
ttgaaggccgacaccgaactgcatgtggacatacaatttcaactaaatcgtctaccatat
tgtgaatggcatcatgccgttgataaaattaccgattttaaaattatattcccagccact
gaagtggaacccaacataccgtggacaccgaagaaacaatggtcggagtcttgcgaaccc
aaactgaatgccaagcaaagagaggctgtgaatgccataactacaacgctaagcataaaa
ctgccccccatattgttgattggaccctttggcacgggaaaaacttacacactggcccag
gccataaaacagctgcttacacagcctgaagccaagatactcatatgtacacactcaaat
tcggcggctgatttatatattaaggaatatcttcatccatggattgaagcaggtctggaa
gaagctactcctcttagggtgtactatcacaaacgttgggttgctaccgtcaatagtgta
gtgcaaaaatattgtatcactgatggtgctggcaatttccgtcgtcccacggtcgaggat
attatgaaacatcgaattgtggtcgtcactctaagtatatccatggaattggccaattta
gatctccccaagggttacttcacccacatattcttggatgaagccgcccaggcaatggaa
tgtgaagcaataatgccactggccctagccaatgatagtactcgcattgttttggctgga
gatcacatgcaaatgagccctgaactcttctcggcatttgccaaggagcgcaaattgcat
atatcattgctggaacgtttatacgatcattatccttcaaactttccctgcaaaattcta
ttgtgtgaaaattatcgtgcccatgaagcgattataaaatttacatccgagctgttctat
gagcaaaaactgatagcatcagggaaacagcccagacatgagaaattttatcctctcacg
ttctttacaactcgtggtgaagatgttcaagataagaattcaacagctttttacaataat
tcggaggtttatgaagtagtagaacgtgtgtccgagctgcgcaagaaatggcctagttcg
tggggtaaaataaatgatgccagcattggaataatgacaccctatgccgatcaggtgttt
cgaattcgttccgagctgcgcaaaaggcgaatgggtggcatatcagttgaacgtgttctc
aatgtccagggcaaacagtttcgagccatttttctatcaacggtacgtacgagaagaacg
tgtttacccatcgccggtggtagtggtgttgggggcacagctggcggcggtggatttccc
ggtcaatcgtctagtccttcagaagacgccgactatggatttttaagtaactcaaaacta
cttaacactgcaataacaagagcacaaagtctggtggctgtagttggagatccggtggcc
ttgtgttcaataggacgatgtcgtaaagtttgggagcgtttcattgagatatgtgatgaa
aataagtcactttttggtataaccatgtggcaactgcgttctcaactcgatggtgtcgaa
ctaaagcggggatatgtccttaatccactcgcgcccgaatttataccacgttcgttacaa
cctgaagcttacttacgtgatcaagctgccatgtactatgccatggctgccaacaatcat
catccaatgggcccacatccaggacatcatcatggccccggtggtatgggaccacatcca
agtttattgcccggaggtggctcgggacaaataccaccacatcatgcagctgccatggca
aatcaacaaatgccacatatgtatggacctcattcagcggcggcagcggcatataacgcc
gcagctgctgcagcagctgtcatgatgaatcaaggcatggtgggcggtaaaggtggacac
catttccatgggcatccaaatcatatgcccatgcgagccataggtccacccccagcgggt
ggtcctcagcagcctcctcaatctgctcctcccatgagtgggcaacaattcaatcctcgg
gggccaccaccaccacctgtacacttgggtcaaccaccaccaaatggagctggtggcaat
caattttcccagtacatgccgtggcaacacgcccaacaacaacaacttaggccacctggc
agtggtggaaattttggatctgctcctggtcaacaatctggcgttccgacgggccaaaat
ccaaatgcaagtctgtggggtccaccaccgcaatcaaatccttggactgtgttaccaaaa
caacagcaaatgcagcaacctcccaaccccaatggagccaatggtcggcaaatgggctcg
cagcaaactggccagaacatgagagggcagagtgttcccttgcaaccaccacctctatca
aatcaacaacaaatgcgaaacaatcccaatgacttaggctatttggctaataaagccctg
tacgctggcaaacaacatcccggtcagggtgcacaggtgccaccaactcaggtgcatagc
aactttggaggttttggtggacaggggaatgcacccccaccaccgcctaaccaattgcaa
atgatgaaccaacgtaatatgagcggcatacctaatggacccataagtcctatggaccct
tttatgcctaggccacctgcagctggaggtgcggcaccaaatcagaacgccgccttcttt
ggacaaaacaatctaccaggccccatgaaagataaagattttcaattcctaaacaacgtc
catgttccactgaatatcggtggaacaatgttccaagccccacctccaccaccgaatgcc
atggttggctcggccaataagcaacaatcacctacagcactaagattcccacagccccac
gaatatgcctcacttttgccgccaaatatgaatatctacgaaatggcctttgaaccgaaa
gaatcgcaatacaagtggtacttaaagcttttggagacacagggtcaagatgctgccaat
aaatttaccgaagtgttgcgacaagtaagcaccatgatgcagcaacaacagccgcaacct
caacagccggtaaataaacctccacaacatttgcaacaaacctatatgaataacatggga
gttcagccacagcctccaacacaacagcagcagcagcaacttatgccaagagatgcctct
tttatgcaaccactgatgagttaccagcaacaacagccaccccagcagcaacaacaaccg
cctcaaaggaatgttaacccctttatgggtccactaccgccgcccagtaatcccatgcca
tcaaatgttggtctcaacgatgaaactccacccttggatattaattttaatcaacaaatc
gatatggtttttaattcgatactcaatggcaatgaaatttcacagcccatattgcgagat
ttattcggtgttgctggcggtagtagtagcaacaatgccggaccatcagcaatgaacggt
ggcgatatgatactcaactcgaattcatcatcgtctaataacctattgggtggcagtaaa
atatttccaaatattggcaccggtggaagttcggcaaatggcgttggtgggggtggcggt
cctgctgtcatgaataatcatcagggtaacatggccaagaatacgatgggaccaaattgt
atgttgggtggaatgccaccgcagcagcaaggcgccgccaatccaccaagcggttttatg
ggaaataactctctgctgaataacaaagaatttatgttgggtccaaatatatcgggaggc
ggagctggttcaacatcatcaaactcatcgtcggtacccctgtatagacgtcaaggcctt
acaatgggaaatggtcacaatttaaacagtgccggtaattcatcggcatctactagtggt
cattcgctttcatcgtctacaccagataatattctaaacagcagtcccaatgatatatta
gctggtttaagtaccggttcgaatacactgattgaagcactatttcaagaccaacatcag
caacagaataatgccacattgcaaaaattattgtataataatttcaatgcaagtggcctt
aaaggaggtgttggtggcggcgacatggatttgtttatgggcaataatagttttgttaat
gccttgaccgatggcgtggctaatagttttcatgcgcccaattatgagcaaacttcggca
aatagtgtaaactcaagtggtggcaataacatcattggaggtcctaatactacagcaaca
ggtgctgctggcgatggccgcaataccacatatgctgccgttttgagccaaggtcctcaa
gcccaagaagcattacagcatcataattatgctcataatgctgccctaactacaggtccg
ggaggagcagctggattggttggcaatggtttagctggcctgggtttgaatgtaaacaat
tcagcaaatggtgatggcggagataaggatccgtttgcagctatacgagaactgggtcaa
ggtacgaatggtttttataattattttcaataa
DBGET
integrated database retrieval system
