Methylorubrum extorquens DM4: METDI0217
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Entry
METDI0217 CDS
T00947
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
mdi
Methylorubrum extorquens DM4
Pathway
mdi00541
Biosynthesis of various nucleotide sugars
mdi01100
Metabolic pathways
mdi01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
mdi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
METDI0217 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
mdi01005
]
METDI0217 (kdsB)
Enzymes [BR:
mdi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
METDI0217 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
mdi01005
]
Lipid A
METDI0217 (kdsB)
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Motif
Pfam:
CTP_transf_3
NTP_transf_3
DUF2064
Motif
Other DBs
NCBI-ProteinID:
CAX21886
UniProt:
C7C6Y2
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All DBs
Position
complement(222280..223023)
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AA seq
247 aa
AA seq
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MSDPLILIPARLAATRLPSKPLADIAGVPMIVHVWRRAVEAGIGPVVVATDTDAVAEVIE
AQGGLAVMTRPDHPSGSDRLAEALEIVDPDGNHDVVVNVQGDLPTIDPAIIAASVMPLAD
PQVDIATLCAVIHRPEEMDDPNVVKIIGHTVGPNRLRALAFTRARAPWGDGPLFHHIGLY
AYRRKALARFVALPQGELEQREKLEQLRALEAGMRIDAMIVEDLPLGVDTPADLERARTL
LAIRRLN
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatcccctgatcctgattccggcccgcctcgccgcgacccggctgccgtcgaaa
ccgctcgccgacatcgcgggcgtgccgatgatcgtgcatgtctggcgccgtgccgtggag
gcgggaatcggtcccgtcgtggtcgccaccgacaccgacgcggtcgccgaggtgatcgag
gcgcagggcgggctggcggtgatgacccggcccgaccacccctccggctccgaccgtctc
gcggaagcgctggagatcgtcgatcccgacggcaatcacgacgtcgtcgtcaacgtccag
ggcgacctgccgaccatcgacccggcgatcatcgccgcttcggtgatgccgctcgccgac
ccgcaggtcgatatcgccaccctctgcgccgtgatccaccggcccgaggagatggacgat
cccaacgtggtcaagatcatcggccacacggtgggacccaaccggctgcgcgcgctcgcc
ttcacccgcgcccgtgccccctggggcgacgggccgctgttccaccatatcggcctctac
gcctatcgccggaaggcgctggcgcgcttcgtcgccctgccgcaaggcgaactggagcaa
cgcgagaagctggagcagctacgcgcgctggaggccggcatgcgcatcgacgcgatgatc
gtcgaggacctgccgctcggcgtcgatacccccgccgacctcgagcgcgcccgcacgctg
ctcgccatccgccgcctgaactga
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