Methylorubrum extorquens DM4: METDI5127
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Entry
METDI5127 CDS
T00947
Name
(GenBank) putative sugar nucleotide dehydratase
KO
K08678
UDP-glucuronate decarboxylase [EC:
4.1.1.35
]
Organism
mdi
Methylorubrum extorquens DM4
Pathway
mdi00520
Amino sugar and nucleotide sugar metabolism
mdi01100
Metabolic pathways
mdi01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
mdi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
METDI5127
Enzymes [BR:
mdi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.35 UDP-glucuronate decarboxylase
METDI5127
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Ortholog
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
3Beta_HSD
adh_short
NmrA
UDPG_MGDP_dh_N
Motif
Other DBs
NCBI-ProteinID:
CAX26742
UniProt:
C7CKH2
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All DBs
Position
complement(5050439..5051440)
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AA seq
333 aa
AA seq
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MKKRILVTGGAGFVGSHLCDRLVAQGHDVLAVDNFYTGDRSNLAQHLSNPRFEVMRHDVT
FPLYVEVDEIYNLACPASPIHYQRDPVQTTKTSVIGAINMLGLAKRLGIPILQASTSEIY
GDPDVHPQPEDYRGLVSVSGPRACYDEGKRCAETLFFDYQRRHHVPIRVARIFNTYGPRM
NRDDGRVVSNFVVQALRGEPITLYGDGRQTRAFCFVDDLVEGLMRLMNVEGTLDGAVNLG
NPTEVTIAEIAHRIIALTGSRSEIVYRPLPQDDPRQRCPDITRAKAMLHWTPKVGLDEGL
TRTIAYFEALLSASGSSVTPFEPALPELAKTGS
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagcgtatcctcgtgacgggtggggccggttttgtcggcagccatctgtgcgat
cgactggtggcgcagggacacgacgtgctcgcggtcgataatttctacacgggcgaccgg
tcgaatctcgcccagcacctgagcaatccgcgcttcgaggtcatgcgacacgacgtgacc
ttcccgctctatgtcgaggtggacgagatctacaatctcgcctgccccgcctccccgatc
cactatcagcgcgacccggtgcagaccacgaagacgagcgtgatcggggccatcaacatg
ctcgggctcgccaagcggctcggcatcccgatcctccaggcctccaccagcgagatctac
ggcgatccggacgtgcacccgcagccggaggattatcgcggcctcgtcagcgtcagcggc
ccgcgcgcctgctacgacgagggcaagcgctgcgccgagactctgttcttcgactaccag
cgccggcaccacgtgccgatccgcgtggcacgcatcttcaacacctacgggccgcggatg
aaccgcgacgacggccgggtcgtctcgaacttcgtggtgcaggcgctgcggggcgagccg
atcaccctctacggcgacggccgccagacccgcgccttctgcttcgtcgacgacctcgtc
gaggggctgatgcgcctgatgaacgtcgagggcacgctcgacggcgcggtcaatctcggc
aacccgaccgaggtgaccatcgccgagatcgcccatcggatcatcgcgctcaccggctcg
cgctcggagatcgtctaccgtccgctgccgcaggacgacccgcgccagcgctgccccgac
atcacccgggcgaaggcgatgctgcactggaccccgaaggtcgggctcgacgaggggctc
acgcggacgatcgcctatttcgaggcgctgctctcggcctccggctcgagcgtgacgccg
ttcgagccggcgctgcccgaactcgcgaagaccggctcatga
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