Malus domestica (apple): 103408170 Help Entry 103408170         CDS       T03194                                  Name (RefSeq) DNA mismatch repair protein MSH6   KO K08737   DNA mismatch repair protein MSH6 Organism mdm  Malus domestica (apple) Pathway mdm03430   Mismatch repair Brite KEGG Orthology (KO) [BR:mdm00001]  09120 Genetic Information Processing   09124 Replication and repair    03430 Mismatch repair     103408170  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:mdm03400]     103408170 DNA repair and recombination proteins [BR:mdm03400]  Eukaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     Mismatch and loop recognition factors      103408170 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  MutS_V MutS_III MutS_I MutS_IV MutS_II PTM_DIR17_Tudor Agenet AAA_29 Motif Other DBs NCBI-GeneID:  103408170 NCBI-ProteinID:  XP_028956286 LinkDB All DBs Position 3:37345995..37354617 Genome browser AA seq 1318 aa AA seqDB search MSASRRRTNGQSPLVNPQRQITSFFSKATSTPSPISSKQTQNPKSTRISSKQTQNPKSTP ISSKPTLIPKSTPISSRQTLNPNPNPSPGHSPSPTTPSPLDSKPSSKTSPKKSHGHEVVG KRIKVYWPLDKSWYEGYVKCFNKHSGKHLVQYDDAEEEMLDLEMEKIEWVPETVKIFKRL RRGPLPTPTNVDVDVVMEDEDKEDSNGVADDDSSDEDWGKSGDKELVAEVGDDEEELREL EDEEDDVVPTNTNKRKRGDSGGRRKLSGGGSLGSAKKTKCGGNVGMNGFKGVSPEPTPNA EGTKATNGMDTVLSGDASARFSLREAEKLHFLGEQRMDAKRRSLGDANYDPRTLYLPPGF LKSLSGGQRQWWEFKSKHMDKVIFFKMGKFYELFEMDAHIGAKELGLQYMKGEQPHCGFP EKNFSMNVEKLARKGYRVLVVEQTETPEQMDLRRKKDGSIDKVVKREICAVVTKGTLTEG EMLSANPDASYLMAVTENSQNLANENAERVFGVCVVDVATSRVILGQFGDDLECSALSCL LSELRPVEIVKPANLLSPETEKVLIRHTRSPLVNELVPVLEFLDAERTVQEVRSIYRRAD DQDVSGSPKKDGFHGSDSHLEEDSYGCLPDVLSEMVRAGENGISALSALGGALFYLKQAF LDETILRFAKFELLPSSGFGDTVSKPYMVLDSAALENLEIFENNRNGDSSGTLYAQLNHC VTGFGKRLLRTWLARPLYHVELIKQRQDAVASLRGVNLPYALEFHKAVSRLPDMERLLVR VFSSSNACGRNAKKVVLYEDAAKKQLQEFISALRGCELMAQTCCSLNVILENVESAQLHH LLTLGKGLPDVNSVLKHFKDAFDWVEANNSGRIIPHEGVDIEYDSACEKVKEIESHLTKH LQEQRKLLGDKSITYVTVGKDSYLLEMPESLCSCIPPDYELRSSKKGFSRYWTPDIKKSL TELSQAETDKESSLKSILQRLIGRFCEHRLKWRQLVSVTAEIDVLISLAIASDYFEGPSC QPVVMSSSCTNEVPRFSAKSLGHPVLRSDSLGKGTFVSNDISIGGSGHASFILLTGPNMG GKSTLIRQVCLAVILAQLGADVPAESFELSPVDRIFVRMGAKDNIMVGQSTFLTELSETA TMLSSATRNSLVALDELGRGTSTSDGQAIAESVLEHFIYKVQCRGMFSTHYHRLAVDYQN NSKVSLCHMACQVGNGDGGVEEVTFLYRLNPGACPKSYGVNIARLAGLPISVLKKATAKS REFEATYGKHRKASGDNICFQELISIVAKLTSHEFTKSIDMDSLTEVWHRARLLQQES NT seq 3957 nt NT seq  +upstreamnt  +downstreamnt atgtcggcgtcgcgtcgtcggaccaacggccaatccccactggtcaacccacagcgccaa atcacttccttcttctccaaagccacttccactccgtccccaatttcttccaaacaaacc caaaaccctaaatctacccgcatttcttccaagcaaacccaaaaccctaaatccaccccc atttcttccaaaccaaccttaatccctaaatctacccccatttcttccagacaaacccta aaccctaatccgaatcctagtcccggtcatagccctagccccacaaccccttcgcctctc gattccaagcccagctccaagaccagccccaaaaaatcccacggccacgaggttgtcggg aagaggatcaaggtttactggccgttggataagagctggtacgaaggttatgtcaagtgc ttcaataagcacagtggtaagcatttagttcagtacgacgatgctgaagaagaaatgttg gatttggaaatggagaagatcgagtgggtcccggaaaccgtgaagattttcaagcgcttg aggcgaggccctttgccaactcccaccaatgtggatgtagatgtggtgatggaggatgag gataaggaagacagcaacggtgtagctgatgatgattcgagcgatgaggattggggaaag agtggggacaaagagttagttgctgaggttggtgacgatgaagaggagcttagggaattg gaggatgaggaagatgatgtggttcccacgaacacaaacaaaagaaagcggggtgactcc ggtggtagaagaaaattgagcggtggagggagtttggggtctgctaagaagaccaagtgt ggtggaaatgtgggtatgaacggcttcaagggcgtgtcaccggagcctacccctaatgct gaagggacaaaggcgactaatggtatggatactgttttatctggtgatgcctcagcaagg tttagcttgcgtgaagctgagaagttgcacttccttggggaacagcgcatggatgccaaa agaagaagccttggagatgcaaattatgatccaagaactctgtacttacctcccggattc ttaaagagtttatcaggtggccagagacaatggtgggagtttaagtcaaaacacatggac aaagttatatttttcaagatgggcaaattttatgaactttttgaaatggatgcacatata ggagcaaaagaacttggtctgcagtatatgaagggtgaacaaccccattgtggatttccg gagaagaatttctcaatgaacgtggagaaacttgctaggaaggggtatcgagttcttgta gtggagcagacagaaacacctgaacagatggatcttcgtcgtaaaaaggatggctctata gataaggttgtgaaacgtgaaatatgtgcagtggttacaaaaggaacactaactgaggga gagatgctgtcagcaaaccctgatgcttcttatctaatggcagtgactgaaaattctcag aatttggcaaacgaaaatgcagagcgggtttttggggtttgtgtagttgatgttgctacc agccgggtcattcttgggcagtttggagatgatctagagtgcagtgccttgtcttgtctc ttgtctgagctgaggcctgttgaaattgtaaaacctgcaaatctactcagtcctgaaaca gagaaagtgctgattaggcatacaagaagtcctctagtgaatgagttagtcccagtattg gaattcttggatgctgagagaactgttcaggaagttagaagtatatacaggcgtgccgat gatcaagatgtttctggttctccaaagaaagacggttttcatggcagtgattctcattta gaagaagatagctatggctgcttgccagatgtgttgtcagagatggtgagagcaggtgag aatggcatctctgcactttcagctcttggaggtgctcttttctatttaaagcaggccttc ctggatgagacaatactcagatttgcaaaatttgagttacttccaagttctggttttggt gataccgtatcaaaaccatacatggttcttgactcagctgccctagagaaccttgagatt tttgagaacaacagaaatggagactcttcagggacattgtatgcacaattgaaccactgt gttactggatttgggaagagattgcttagaacatggcttgcaagacctctctatcatgta gaattaataaagcaacgccaggatgctgttgcaagtcttcggggagttaatcttccttat gcacttgaatttcataaagcagtgtctaggctgccggacatggagcggttgcttgtgcgt gtcttctctagtagtaatgcttgcggaaggaatgctaagaaagtggttttatacgaggat gctgcaaaaaaacagcttcaggagtttatttcagctttacgtggttgtgaactcatggct caaacatgttgttctcttaacgttatcttggaaaatgttgaatctgcacaacttcatcat ctgctgacactgggtaaaggtcttcctgatgtcaactcagttctaaaacatttcaaggat gcctttgattgggtagaagccaataattcaggtcgtataatacctcatgaaggagtcgat attgagtatgactctgcttgtgaaaaagtaaaggagatagagtctcatttaacaaaacac ctccaagaacagagaaagttactgggagataaatcgatcacttatgtcacagttggaaaa gattcttacctattggaaatgccagaaagtctgtgcagttgtattcctccggattatgag ttacgttcgtccaaaaagggtttctcgaggtactggaccccagatatcaagaagtcattg acagagctctcgcaagctgaaactgataaggagtcctcactaaaaagcattttgcagagg ttaattggacgtttctgcgagcatcgtcttaaatggagacaattggtctctgtgactgca gaaatcgatgttttaatcagtctagcaattgcaagtgattattttgaaggaccctcttgt cagccagttgtcatgagttcatcatgtactaatgaagtacctcgtttttctgcaaaaagt ttgggccatcctgttcttagaagtgattctttaggaaagggtacatttgtatccaacgac atttccattggaggttctggccatgcaagctttatccttctcactggtcctaacatgggt ggaaagtccactcttattcgccaggtttgcttggctgtgattttagcacagttaggagca gatgttcctgcagagagctttgagctatctcctgttgaccgaatctttgttcgtatgggt gctaaagataatatcatggtaggccaaagtacatttctgacggagctttcagaaactgca acaatgctgtcttcagctactcgcaattcattggtggcactggatgaacttggacgtgga acatcaacttcagatggacaagccattgcggaatcagttcttgaacattttatctacaag gtccagtgccgaggaatgttttctacccattatcaccgactagctgttgattatcaaaat aattctaaggtttcactatgtcatatggcatgccaagttggaaacggagatggaggtgtg gaagaagttacatttctatacaggttgaatcctggtgcatgccctaaaagctatggtgtc aacattgcacggttagctggacttcctatttcagtccttaaaaaagctaccgccaagtcc agggaattcgaggctacatatggtaaacacaggaaggcatctggagataacatttgcttt caagagttgattagtattgtggcaaaattgacgagtcatgagtttaccaaaagcattgac atggactccctgacagaagtttggcatagagcaagactactacagcaagaaagttga

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