Malus domestica (apple): 103415187
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Entry
103415187 CDS
T03194
Name
(RefSeq) probable pectate lyase 18
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
mdm
Malus domestica (apple)
Pathway
mdm00040
Pentose and glucuronate interconversions
mdm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
103415187
Enzymes [BR:
mdm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
103415187
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
103415187
NCBI-ProteinID:
XP_008351757
UniProt:
A0A498I2G8
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Position
14:complement(join(25278661..25278882,25278989..25279127,25279333..25280079,25280326..25280453))
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AA seq
411 aa
AA seq
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MARPSSGPSLLSLLLFSLLSPTLISCRPLHLQDPELVVQEVQRNISDSVSRRNLGYLSCG
TGNPIDDCWRCDPNWEKNRQRLADCAIGFGKNAIGGRDGKLYVVTDSGDDDAVNPKPGTL
RHAVIQDEPLWIIFQRDMTIQLKEELIMNSFKTIDGRGASVHIAGGPCITIQFVTNIIIH
GLNIHDCKQGGNAMVRNSPEHFGWRTISDGDGVSIFGGSHVWVDHCSLSNCKDGLIDAIH
GSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHV
VNNDYTHWEMYAIGGSANPTINSQGNRFAAPDIRFSKEVTKHEDAPESEWKNWNWRSEGD
LMLNGAFFRASGAGASSSYARASSLGARPSSLVGSITTTAGALSCRKGSHC
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggcaaggccctcctcaggcccctcacttctctctctcctcctcttctctctcctctcc
ccaaccctcatttcctgcaggccacttcatcttcaagaccctgaattggtagtacaagag
gtacaaaggaacattagcgactcagtgtctaggaggaacttgggctacttatcatgtggg
actggaaaccctatcgacgactgctggcggtgcgatccgaactgggagaagaacaggcag
cgtctagcagattgcgcgatagggttcgggaaaaacgccatcggtggaagagacgggaag
ctttacgtggtcacagattccggcgacgacgacgccgtgaaccccaagccaggaacccta
cgacacgccgtcatccaagacgagccgttatggatcattttccagcgcgacatgaccatc
cagctcaaggaggagctgatcatgaactccttcaagacaatcgacggccggggagcgtcc
gtccacattgccggcgggccatgcatcaccatccagttcgtgaccaacattattatccac
ggactgaacatacacgattgcaagcagggtgggaacgctatggtgaggaactccccagag
cacttcgggtggaggaccatatcggacggcgacggagtgtcgatcttcggtgggagccac
gtgtgggtggaccattgctcgttgtccaactgcaaagatgggttgattgatgctattcat
gggtccactgcgataacaatttcaaacaattacatgacgcaccatgataaggtgatgctt
ttggggcatagtgattcgtatacacaagacaagaacatgcaagtcaccattgcattcaat
cactttggagaagggttggttcaaagaatgccaagatgtaggcatggatatttccatgtg
gtgaacaatgactatacccattgggagatgtacgctattggagggagtgcaaaccctaca
atcaatagccaagggaacagatttgccgcaccagatatcagattcagcaaagaggtgacc
aaacatgaggatgcaccagaaagtgaatggaagaactggaattggaggtcggaaggagac
ttgatgttaaacggtgcgttttttagggcatcgggtgccggagcttcctcaagctatgcc
agggcttcgagcttgggtgcaaggccatcttctctagtgggttcaatcaccacgactgcc
ggcgcacttagctgccgaaagggctctcattgctga
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