KEGG   Malus domestica (apple): 103423184
Entry
103423184         CDS       T03194                                 
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
mdm  Malus domestica (apple)
Pathway
mdm03030  DNA replication
mdm03410  Base excision repair
mdm03420  Nucleotide excision repair
mdm03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    103423184
   03410 Base excision repair
    103423184
   03420 Nucleotide excision repair
    103423184
   03430 Mismatch repair
    103423184
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mdm03032]
    103423184
   03036 Chromosome and associated proteins [BR:mdm03036]
    103423184
   03400 DNA repair and recombination proteins [BR:mdm03400]
    103423184
DNA replication proteins [BR:mdm03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    103423184
  DNA Replication Termination Factors
   ELG1-RFC complex
    103423184
Chromosome and associated proteins [BR:mdm03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    103423184
DNA repair and recombination proteins [BR:mdm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     103423184
  Check point factors
   HRAD17(Rad24)-RFC complex
    103423184
SSDB
Motif
Pfam: RFC_C DNA_pol3_delta2 RCF1-5-like_lid AAA Rad17 AAA_lid_RFC1 Sigma54_activ_2 Mg_chelatase RuvB_N DUF815 AAA_22 ABC_tran nSTAND6 AAA_29 RsgA_GTPase AAA_23 AAA_2 AAA_5 AAA_24 AAA_16 T2SSE
Other DBs
NCBI-GeneID: 103423184
NCBI-ProteinID: XP_028946114
LinkDB
Position
12:complement(join(1202074..1202132,1202559..1202604,1202871..1202945,1203087..1203156,1203773..1203871,1204004..1204140,1204271..1204452,1204560..1204728,1205433..1205465,1205608..1205718,1205833..1205916))
AA seq 354 aa
MLWVDKYRPKTLDQAIVHQDIAQNLKKLVAEQDCPHLLFYGPSGSGKKTLIIALLRQIFG
PSADKVKVENRAWKVDAGSRTIDIELTTLSSTNHIELNPSDAGFQDRYIVQEIIKEMAKN
RPIDTKGKKGYKVLVLNEVDKLSREAQHSLRRTMEKYSAYCRLILCCNSSSRVTEAIRSR
CLNVRINSPTEDQIVKVLEFIGKKEGLQLPSGFVARIAEKSNRSLRRAILSLETCRVQEY
PFTSNQAIPPMDWEEYVSEIASDIMKEQSPKRLYQVRQKLYELLLNCIPPEIILKRLLFE
LLKKLDAELKHEVCHWAAYYEHRMRLGQKAIFHLEGFVAKFMSIYKAFLIEAFG
NT seq 1065 nt   +upstreamnt  +downstreamnt
atgttgtgggtcgacaagtaccgacccaaaaccctagaccaggcaattgtccaccaagat
atcgcccaaaacctcaagaaacttgtcgcggagcaggactgcccccatttgctcttttat
ggcccttctggttccggcaagaaaaccctaatcatcgcccttcttcgtcagatattcgga
cccagtgccgacaaggtgaaggtggaaaacagggcatggaaagtcgatgctgggagtaga
acgattgatatagagctgactacattatcgagcaccaaccatattgaactgaaccccagt
gatgcagggtttcaagacagatacattgttcaagagataattaaagaaatggctaaaaat
agacccattgacacaaaagggaaaaaaggatataaggtcctagtgctgaatgaagttgac
aaactttccagggaagcgcagcattctcttcgaagaactatggagaaatatagtgcttat
tgccggctaatactatgctgtaacagttcttcaagggttactgaagcaatcaggtctcgg
tgtcttaatgtgcgaataaattcaccgacagaagatcagattgtgaaggtattggagttc
attggaaagaaagaagggctgcaacttccttcgggatttgttgctcgtatagctgaaaaa
tcaaataggagcttaaggagagctatattgtcattggaaacttgtcgtgttcaagagtat
ccgtttacaagtaaccaggcaataccacctatggattgggaagaatatgtttctgaaatt
gcttctgatataatgaaggagcaaagccctaaaaggctttatcaagtgcggcaaaagttg
tatgagctgctgcttaattgtattcctccggagatcatcttgaagagacttctttttgag
ttattgaagaagttggatgcggagttgaagcacgaggtttgtcattgggctgcatattat
gaacataggatgcgtcttgggcaaaaagccatatttcaccttgaagggttcgtggcaaag
ttcatgagcatttataaggctttcctcatcgaagcgtttggctga

DBGET integrated database retrieval system