Malus domestica (apple): 103430010
Help
Entry
103430010 CDS
T03194
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
mdm
Malus domestica (apple)
Pathway
mdm00040
Pentose and glucuronate interconversions
mdm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
103430010
Enzymes [BR:
mdm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
103430010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
DUF4834
Motif
Other DBs
NCBI-GeneID:
103430010
NCBI-ProteinID:
XP_028948126
LinkDB
All DBs
Position
14:join(27743176..27743378,27743522..27744176,27744272..27744514,27744594..27744812)
Genome browser
AA seq
439 aa
AA seq
DB search
MEANYTLNVFILCIFIITITIPATVRANIADFDAHWQGRAKEAKQAANEAYNKNPAQVTE
SFNKEVHDTFDAANKTRRNLKQKYKGPCLATNPIDRCWRCDPNWETNRKKLADCAKGFGH
KTTGGKAGKIYVVTDNSDNDMVNPKPGTLRHAVIQTGPLWIIFARDMRIKLREELMVTSD
KTIDARGANVHIEDGAQITLQFVKNVIIHNLHIHDTKPGNGGMIRDSVNHYGQRTRSDGD
GISMYGASNVWIDHVSGSNCADGLVDAIQGSTAITISNCHFTNHNDVMLFGSSDSNSQDE
VMQITLAFNHFGQGLIQRMPRCRWGFFHVVNNDYTHWIMYAIGGSQHPTIISQGNRFIAP
SNNASKEVTKRTSGAENEWKSWNWRSENDLMMNGAFFVESGSPIRNLPKADMIKAKPGTF
VTRLTRFAGPLKCIKGKPC
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggaagctaattacacgctaaatgtgtttattttatgtatttttattattacaatcaca
attccggcaacggtgagggccaacattgcggatttcgacgcgcactggcaaggtcgagca
aaagaagcgaagcaagccgccaacgaagcctacaataaaaatcctgcacaagtcactgaa
agtttcaacaaggaagtccacgacacgtttgatgccgcgaataaaacgagaaggaacttg
aaacagaagtacaagggtccatgcctggctacaaaccctattgatcgttgctggagatgt
gacccaaactgggaaacaaatcgcaagaagctcgctgattgcgccaaaggatttgggcac
aagacgacaggaggcaaggctggaaaaatctatgtggtgactgataactctgacaatgac
atggtgaacccaaaaccagggacactacgccacgctgtgatacaaactgggccactttgg
atcatattcgctcgagacatgagaataaagctaagagaagagcttatggtgacgagtgac
aagacaattgacgcacgaggtgcaaatgtgcacattgaggatggtgcacaaattacacta
cagtttgtgaagaatgtgatcatccataatctccacattcatgataccaagccaggaaat
ggtggcatgattagggactcggtgaatcactatggacaacgcacacgcagtgatggtgac
ggtatatcaatgtatggagcctcaaatgtttggatagaccatgtctccgggtcaaattgc
gcagatggactcgttgatgccatccaggggtctacagccatcaccatatccaactgtcac
ttcaccaatcataatgatgtgatgttatttggttcaagtgatagcaactctcaggatgaa
gtgatgcagataactctggctttcaaccatttcggtcaggggttaattcagcgtatgcca
aggtgccgatgggggtttttccatgttgtaaacaatgactacacgcattggattatgtac
gctattggtggaagccaacatcctaccataattagccagggcaaccggttcattgccccg
tccaataatgccagtaaagaggtgacgaagaggacaagtggagccgagaatgagtggaaa
tcatggaattggagatcagagaacgatcttatgatgaatggagcattctttgttgaatcc
ggaagcccaatcaggaatctcccaaaggcggatatgatcaaggcaaagcctgggacattt
gtgactaggctcacgcgctttgcaggtcctctaaaatgcattaaagggaagccatgctag
DBGET
integrated database retrieval system
