Malus domestica (apple): 103433816
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Entry
103433816 CDS
T03194
Name
(RefSeq) phytochrome A
KO
K12120
phytochrome A
Organism
mdm
Malus domestica (apple)
Pathway
mdm04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
103433816
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GFIT
Motif
Pfam:
PHY
PAS
PAS_2
GAF
HATPase_c
HisKA
PAS_4
PAS_9
EF-hand_4
Motif
Other DBs
NCBI-GeneID:
103433816
NCBI-ProteinID:
XP_008370326
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All DBs
Position
4:27556955..27562624
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AA seq
1125 aa
AA seq
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MSSSRPSNSSSNSGRSRHSARIIAQTTVDAKLHADFEESGSSFDYSSSVRVGSSVGGDQQ
PRSEKVTTAYLHHIQKGKTIQPFGCLLALDEKTFKVIAYSANAPEMLTTVSHAVPSVGDS
PVLGIGTDIRTIFTAPSASALHKALGFGEVSLLNPILVHCKTSGKPFYAITHRVTGSLII
DFEPVKPYEVPMTAAGALQSYKLAAKAIARLQSLPSGSMERLCDTMVQEVFELTGYDRVM
AYKFHDDDHGEVVSELTKPGLEPYLGLHYPSTDIPQASRFLFMKNKVRMIVDCCAKHVKV
FQDEKLPLDLTLCGSTLRAPHSCHLEYMKNMNSIASLVMAVVVNEGDDEVTDPDSVPPQK
KKRLWGLVVCHNTSPRFVPFPLRYACEFLTQVFAIHVNKEIELEEQMVEKNILRTQTLLC
DMLLRDAPLGIMSQSPNIMDLVKCDGAALLYKNKVWRLGMTPSDFQLHDIASWLSEYHMD
STGLSTDSLYDAGFPGALALGDVVCGMAAVWLTSKDILFWFRSHTAAEIRWGGAKHEVGE
KDDGCKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDAGTTLEANTKAI
NVRLSDLKLEGMQELEAVTSEMVRLIETATVPILAVDVHGLVNGWNTKIGELTGLPVDKA
IGKHLLSLVEDSSTDTVKKMLNSALHGKEEQNIQFEIKTHGSRADLGPISLVVNACASRD
IRENVVGVCFVAQDITGQKNVMDRFTRIEGDYKAIVQNPNPLIPPIFGADEFGWCSEWNS
AMTKLTGWKREEVMDKMLLGEVFGIHMACCPLKSQESFVNLGVVLNHAMTGQVSEKVPFG
FCARNGKYIECLLCVSKKLDSEGLVTGVFCFLQLASPELQQALHIQRLSEQTAVKRLKEL
SYIRRQIRNPLAGIIFSWKMMEDTELGEEQQLLLHTSAQCQNQLNKILDDSDLDTIIDGY
LDLEMVEFTLHDVLNAAVSQVMMKINAKSIRVVQDAAEEIMTQTLYGDSLRLQQVVADFL
AVSISFVPTGGQLTIEANLTEDQLGQSVHLVHLEIRITHAGGGIPEALLNQMFGNDGDIS
EEGISLLVSSKLVKLMNGDVRYLREEGKSTFMISVELAAAYKVKP
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcttcaaggcctagcaactcgtccagcaattcagggcggtctagacacagtgct
agaattattgctcagacaactgttgatgcaaagctgcatgcggattttgaggagtcgggt
agttcctttgactactcgagctcagtgcgtgttggcagttcagttggcggggatcaacag
cctaggtccgaaaaagtgaccactgcttatctccatcacatacagaaaggcaagacgatc
caaccgtttggatgcttgctagccttagatgagaagactttcaaggtcattgcttacagt
gcgaatgcccctgaaatgctgactacggtcagccatgcagtcccaagtgtcggggactcc
cctgttcttggcataggaacagatattagaacaattttcactgcacctagtgcctctgca
ctgcataaggccctaggatttggtgaggtttctctcttaaatcccatcttagtccattgc
aagacctctggcaagcctttctatgcaataacccatcgagtaacgggcagtttgatcatt
gactttgagccggtgaagccttacgaagtccctatgactgctgccggggccctgcaatcg
tacaagcttgcggccaaagcaattgccagattgcagtctttgcctagtgggagcatggag
aggctttgtgatacaatggtacaagaggtttttgaactcacgggttatgacagggtgatg
gcctataaatttcatgacgatgatcatggagaagtggtctctgagcttacgaagcctggc
ctggagccatatctaggtttgcattatccatccactgacatcccacaggcttcacggttc
ctatttatgaagaataaggtccgcatgattgtcgattgttgtgcgaaacatgtgaaggtt
tttcaagatgagaagcttccgctggatctcacattgtgcggttcaaccctgagagcccca
cacagttgccatttagaatacatgaagaatatgaattccattgcatctcttgttatggca
gtagttgttaatgagggggatgacgaggttaccgatcctgattctgttccacctcaaaaa
aaaaagagactttggggtttggtagtatgccataatacaagtccaagatttgttcctttc
cctctcaggtatgcctgtgagtttttaactcaagtgtttgccatccatgtcaataaggaa
atagagttggaagaacagatggttgagaagaacatcttgcgtactcaaacgctgttgtgt
gatatgctgttacgagatgcacccttgggtattatgtcacagagccctaatattatggat
ctagtgaaatgtgatggagctgccctattgtacaagaacaaggtatggagacttggaatg
actccgagtgacttccagcttcatgacatagcttcatggctctccgagtaccatatggat
tctacgggtttgagtacagatagcttgtatgatgcaggattcccgggggctctagctctt
ggtgatgtagtatgtggaatggcagctgtgtggttaacttccaaggacattctcttttgg
tttcgatcccacactgctgcagaaattcgatggggtggtgcaaaacatgaagtcggtgag
aaagatgatggttgcaaaatgcaccctagatcgtcattcaaggctttccttgaagttgtc
aagacgaggagcttgccttggaaggactatgaaatggatgcaattcattctttgcagctt
attctgaggaatgcattcaaagatgccggaaccaccttggaagcaaacaccaaagcaatc
aatgtaaggcttagtgacctaaaacttgaagggatgcaagaactggaagctgtgacgagt
gagatggtccgtttgattgaaacagcgacggttcccattttggctgttgatgttcatggg
ctggttaatgggtggaatacaaaaattggcgagttaactggtcttcctgttgacaaggca
atcggaaagcatttgctctcactggtggaagattcttcgactgacacagtgaaaaagatg
ttgaactcggcattgcatggcaaagaggaacaaaacatccaattcgagataaaaacacat
ggttctagggctgaccttggtcccatcagcttggttgtgaatgcttgtgcaagcagagac
attcgggaaaatgttgtgggggtgtgttttgtggcacaagatatcactggtcagaagaat
gtgatggacagattcacccggattgaaggtgattacaaagcaattgtacaaaaccctaac
cccttgatccccccaatatttggtgcagatgaatttggctggtgttctgagtggaattca
gcaatgacgaagttaacaggatggaaacgagaggaggtaatggataaaatgcttctggga
gaggtttttgggatccacatggcatgttgtcctctcaaaagccaggaatcttttgtaaat
cttggtgttgtccttaaccatgccatgacaggtcaggtgtccgaaaaggttccctttggt
ttctgtgctcgcaatggaaagtacatagaatgcctgctgtgtgtgagtaagaaattggac
agcgaaggcttggtcactggggtcttttgcttcttgcagcttgctagcccagagctgcaa
caagcacttcacatccagcgcttatcagaacaaactgcagtgaagagattgaaagaattg
tcttatattagaaggcagatccggaatcctttagccggtataattttttcttggaaaatg
atggaggatactgagttgggagaagaacaacaactgcttctgcatacgagcgcccagtgc
cagaaccagctcaacaaaatactggatgactcggatcttgataccatcattgacggctac
ttggacctggaaatggttgagttcacattgcatgacgtactgaatgccgctgtcagtcaa
gtcatgatgaagatcaatgccaagagcatccgtgttgtccaagatgcagcggaagagatc
atgactcagactttatatggggatagtcttaggcttcaacaagtcgtagctgatttctta
gccgtatcaattagttttgtgccaactggaggccagcttactatcgaagctaatttgacc
gaagatcagttaggacaatccgttcatctcgtgcatttggagatcaggatcacacacgcc
ggtggtgggattccagaagcattgctgaaccagatgtttggaaatgacggagacatatct
gaggagggcattagcctgctcgtcagcagcaaactggtgaagctcatgaatggagacgtt
cgttatcttagggaagaaggcaaatcaaccttcatgatatccgtggaactcgcggctgca
tacaaggtgaagccctaa
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