Malus domestica (apple): 103436151
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Entry
103436151 CDS
T03194
Name
(RefSeq) probable pectate lyase 12
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
mdm
Malus domestica (apple)
Pathway
mdm00040
Pentose and glucuronate interconversions
mdm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
103436151
Enzymes [BR:
mdm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
103436151
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
103436151
NCBI-ProteinID:
XP_008372801
UniProt:
A0A498IF40
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All DBs
Position
12:join(16437739..16437869,16437974..16438440,16439326..16439629,16439792..16440139,16441060..16441255)
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AA seq
481 aa
AA seq
DB search
MIPRTCIVLLSLLTSFSPLATAFLNLTLPGQHPNPDEVVLQVNRKVNASLERRQMLQTTQ
KDNLDSTCLTGNPIDDCWKCDPDWPNNRQSLADCAIGFGQYAHGGKGGEYYIVTDDSDDD
AVTPKPGTLRYAVIQTEPLWIVFPRNMLIKLSQELIFNSYKTLDGRGANVHIVGGGCITL
QYISNVIIHNVHIHHCYQSGQANVRSSPTHYGFRTESDGDGISIFGSKDIWIDHCSLSHC
KDGLIDAVMGSTGITISNNYFSHHNEVMLLGHSDDYLPDSGMQVTISFNHFGEKLVQRMP
RCRRGYIHVVNNDFTQWEMYAIGGSGDPTINSQGNRYTAPSNPNAKEVTKRVETAEGKWR
NWNWRSEGDIMVNGAFFVASGEGVELNYEKAYSVEPKSAALIDQLIMHAGALGVGGRDNN
LGKWSSNGDGNGLGSGPDYTDDMSGSSRIPQPPLSSTSTIFSFFISLSCLLFLYIIPDMH
L
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgatccccagaacctgcattgtcctgctttctcttctcacctcattttcccctcttgcc
actgcattcctcaacctcactctccctggtcagcatcccaacccagatgaagttgttcta
caagttaataggaaggttaatgcttcgttagaaagaaggcaaatgctgcaaacaacccag
aaagacaatctggattctacgtgcctgaccggaaacccgatagacgactgctggaaatgt
gatccggattggccaaacaacaggcaaagcctggcagattgtgcaatagggtttggtcaa
tatgctcatggaggcaaagggggtgagtattacattgtgacggacgactcagatgacgac
gcggtgactccgaagccaggcactctcagatatgctgtgattcagactgagcctctctgg
attgtgttccctcgcaacatgctcatcaagctctcccaagaacttatcttcaacagctac
aaaaccctcgatggccgcggagcgaatgtccacattgttggtggtggatgcatcactctg
cagtacataagcaatgtcatcatccacaatgtgcatatccaccattgttatcagtcaggt
caggctaatgtgcgttccagcccaactcactacggctttcgcacagaatcagacggcgat
gggatctccatctttggatccaaagacatatggatagaccattgtagcctatcacactgc
aaggatggactgatagatgcagtgatggggtccacaggaataacaatatcaaacaattat
ttctctcatcacaacgaagtcatgctgcttggtcacagcgatgactacttgcccgactct
ggaatgcaagtcaccatatccttcaatcactttggagaaaagttggtgcagagaatgcct
aggtgtagaaggggctacatccacgtggtcaacaacgacttcacccaatgggaaatgtac
gccatcggaggcagtggagaccctacaattaacagccagggcaaccgctacactgctccg
tcaaaccctaacgccaaggaggtgacaaagcgtgtggagacggcggaagggaagtggagg
aactggaactggagatcggagggggacataatggtaaacggagcattttttgtagcatct
ggggagggagtggagcttaactatgagaaggcctacagtgtggagcccaagtctgctgcg
cttattgaccaactcatcatgcatgctggtgcccttggtgttggtggcagggacaacaac
ctggggaagtggagctcgaacggcgacggaaatggtttaggctcaggtccagactatacg
gatgacatgtcgggaagcagccgtattccacagccgccactttcatccacctccaccatc
ttctcatttttcatctcgttgtcatgcttgctatttttgtatattatcccagacatgcat
ttataa
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