Malus domestica (apple): 103438968
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Entry
103438968 CDS
T03194
Name
(RefSeq) probable helicase CHR10 isoform X2
KO
K20092
chromodomain-helicase-DNA-binding protein 1-like [EC:5.6.2.-]
Organism
mdm
Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mdm03036
]
103438968
Chromosome and associated proteins [BR:
mdm03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
103438968
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HDA2-3
ResIII
gp32
Motif
Other DBs
NCBI-GeneID:
103438968
NCBI-ProteinID:
XP_008375734
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All DBs
Position
7:10872815..10880216
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AA seq
872 aa
AA seq
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MNYEQRLKAAANIILTNDARAGDARVDSEELGVKAKLKPHQVEGVSWLIRRYNLGVNVIL
GDEMGLGKTLQAVSLLSYLKVQKMSPGPFLVLCPLSVTDGWVTEMDTFAPKLKILRYIGD
KENRRILRRTIYKHVNEQTSSTDVLSLPFDVLLTTYDIALADQDFLSQMPWSYAVIDEAQ
RLKNPSSVLYNVLRERYLIPRRLLMTGTPIQNNLTELWALMHFCMPSVFGKLDEFLATFK
EAGDPSSGHDTTKVKEQLKSLRSILGAFMLRRTKFKLIESGDLSLPPLTEITVLAPLVSL
QKKVYMSILRKELPKLLALSSGGSNHQSLQNIVIQLRKVCSHPYLFPGIEPEPYEEGEHL
VQASGKLIILDQLLQKLHEYGHRVLLFAQMTHTLDILQDFLELRKYSYERLDGSIRAEER
FAAIRSFSTQLTKKSLKSQADQNGAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDK
QALQRAHRIGQMNNVLSINLVTGRMVEEVIMRRAERKLQLSHNVVGDDVMDQDGKETSGV
EPSDLRSIIFGLHLFDPDEVNNGVLQMSELNTMAEKVLSVRNKQVATEDERKFELNPADV
LNGNDLVVGEGSTSLGFNLGFDESLYLSWVEKFKEVSQENMDTGSRRNLLEEKRLKLEAA
KKKAEEKKLSKWEELGYHSLSVEDPISPVDSDMMSDSGSVQFVYGDCTQPSKVCPSEPAI
VFSCVDDSGHWGRGGMFDALSKLSASIPDAYQRASEFGDLHLGDLHLIRVYEDSDEPEMD
SNPPQWVALAVVQSYNPRRKVPRSKISIPDLESCLSKASFSAAQSSASIHMPRIGYQDAS
DRAEWYSVERLLRKYASIYGIKIYVYYFKRSA
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgaattacgagcagaggctcaaagccgcggcgaatatcatactcactaatgacgcacgc
gccggagacgcgcgtgtcgactctgaagagctcggcgtcaaggctaaactgaagcctcac
caggtcgaaggcgtgtcgtggctcatacgccgatacaatctaggcgtcaacgtcattctc
ggagacgagatgggactgggaaagacgttacaagctgtttcattactgagctatttgaag
gttcagaagatgtcacctggaccatttttggtattgtgtcctttgagtgtgacggacggt
tgggtcacagagatggacacatttgctccaaagctaaagattcttcggtatattggtgat
aaagaaaatcggcgcattctacgcaggacaatctacaagcacgtaaatgagcagacctcc
tcaactgatgtattgtcattgccttttgatgtcctgttgacaacatatgacatagccttg
gcagatcaggattttctttctcagatgccctggagctatgcagtaattgatgaagcgcaa
aggctcaaaaacccttccagtgttttgtacaatgtcctaagagagcgctatctcatacca
agacggttactgatgactggcacacctatccaaaacaatctcactgaactttgggctttg
atgcatttttgtatgccttcagtctttgggaagctagacgagttccttgcaacattcaag
gaagctggagatccctcatcaggccatgatacaaccaaagtcaaggaacaactcaaaagc
ttaagaagtatcttgggagctttcatgctccgccgtacaaaatttaaacttattgagtct
ggagatttatccctgccaccgcttactgagataacagtgctggcaccattggtcagcttg
caaaagaaggtgtatatgtcaatattgagaaaggagcttccgaagctacttgcactctct
tccggaggttcaaatcatcagtccttacagaatattgtaatacagctgcgaaaagtatgt
agccatccgtatctcttccctggtattgagcctgaaccgtatgaagagggcgaacacctg
gttcaggctagtggtaagcttataattttggatcaactacttcaaaagctacatgagtat
ggacaccgtgtgcttctctttgcacagatgacgcatacccttgatattctgcaggatttt
ctggagttacgaaagtattcctacgagcggcttgatggatcaattcgtgctgaggagcgc
tttgctgccataagaagtttcagcacgcaattaacaaaaaaaagtttgaagtctcaagct
gatcaaaatggtgcttttgtcttcatgatctctacaagagctgggggagttggcttgaat
cttgtggccgctgatactgttatattctatgagcaagattggaatccccaggttgacaag
caagctctgcagcgggcacacaggattggtcagatgaataacgtactgtcaataaaccta
gttacaggacgtatggtggaggaggttatcatgcggagagcagagaggaaattgcagcta
agccataatgttgttggggacgatgttatggaccaggatggtaaagaaacaagtggagtt
gaacctagtgacttacgatccatcatatttgggttacatctcttcgatcctgatgaagtt
aataatggtgtgcttcagatgtcagaactgaatactatggctgagaaggtactttcagtg
cggaacaaacaagtagctaccgaggatgagaggaaatttgagcttaatccagcagatgtt
ttgaatggaaatgatcttgttgtaggagaaggttccacttctcttggtttcaatttgggc
tttgatgaatctttatatctctcttgggttgaaaaattcaaggaggtgtcacaagaaaat
atggatacgggaagcagaagaaatctactcgaggaaaaacgtctaaaacttgaggctgca
aagaagaaagcagaggagaagaagttgtctaagtgggaagagcttggataccattcactg
tctgttgaagaccctatcagccctgtggatagtgacatgatgtctgattcaggttctgtc
caatttgtttatggggattgtacacaaccatcaaaagtttgcccctctgagcctgccatt
gttttcagctgtgttgatgattctggacactggggtcgtggaggaatgtttgatgcactg
tccaagctatctgcaagtatccctgatgcgtatcaacgagcttccgaatttggtgacctg
catcttggtgatcttcaccttataagagtttatgaggattcagatgagcctgagatggac
tcgaatccccctcaatgggtggctttggctgttgtgcaatcttataatcctaggcgtaaa
gtaccccgcagcaagatttctatccctgacttggaaagttgcttatcgaaagcatcgttt
tcagctgctcaaagttctgcttcaatccacatgcctcgtattgggtatcaagatgcatca
gatcgtgcagaatggtactccgtcgaacgccttctacgaaaatatgcttctatttatggc
ataaagatatacgtgtattattttaagcggtccgcttga
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