Methylomonas denitrificans: JT25_018305
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Entry
JT25_018305 CDS
T04191
Name
(GenBank) RNA polymerase subunit sigma-32
KO
K03086
RNA polymerase primary sigma factor
Organism
mdn
Methylomonas denitrificans
Pathway
mdn02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mdn00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
JT25_018305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mdn03021
]
JT25_018305
Transcription machinery [BR:
mdn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JT25_018305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
AMK78419
UniProt:
A0A126T8J7
LinkDB
All DBs
Position
complement(3976838..3978097)
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AA seq
419 aa
AA seq
DB search
MSNLAALPIDSEMDSVTESQPNSLAVQVEQARQTLLELLLENKQTNALIINRFLHDLNSG
VDCSDLIVAKNSEDYKRLLQLLVNSQAASRNNQVVSNENNGQDKVVQADNVVQLMGSEFA
QQSLIARSVNRLLYSLHLLPVFLLDSAAQADGVLSADTEDSADFKKRLGKAKRELRSLRQ
QMISANTGLVAFVAHKYKTSNLSFEDLMQEGLVGLIKAVDRFDPDRGICFSTYAIYWIRQ
AISRLIVKQEKIVRLPVALAEKSATVFEAMRTCYLKYERWPSIAELKMACDLSEQEIKTI
SSYYQATHSLDAAIGDDDDNLELMAKMQQHQFSLPLDELIDQDLAQYVDKAVASLPEKQA
AILTMRFGLRDHTEMTLQAVADQLHVTRERVRQIQNEALKKLKQQFGFDLMLFLEPKDG
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacttagccgcattgccaatcgatagcgagatggattcagtaacagaatcccaa
cccaactcacttgccgttcaagttgaacaggccaggcagactctcttagagttattgctg
gaaaacaagcagaccaacgccttgataattaacagatttttgcacgacctcaattcgggt
gtggactgctcggacctgatcgtcgccaagaactcagaagactataaaaggctgctgcaa
ttgctggtcaacagccaggcggcaagcagaaacaatcaagtagtttcgaatgagaataac
ggacaggacaaagttgtacaagctgataatgttgtacaacttatgggttcggaatttgcg
cagcaatccctgattgctcgctcggtcaaccgtttgttgtacagcctgcatttattgccg
gtatttttactggacagcgcggcgcaagcggacggcgtattgagcgccgacaccgaggac
agcgcggacttcaaaaaacgtctgggtaaagccaaacgcgaattaagaagcttgcgccag
caaatgatttccgccaacaccggcttggtggcgttcgtggctcacaagtacaaaaccagt
aatctgagctttgaagatttgatgcaggaaggtttggtgggcttaattaaagcggtggac
agattcgatccggatcggggtatctgtttttccacttatgccatttattggatcagacaa
gccatctcgcggctgatagtcaaacaagaaaaaattgtgcgtttgccggtggctttggcc
gaaaaatccgccacagtattcgaggccatgcgtacttgctaccttaaatatgagcgctgg
ccgagcatagccgaattaaaaatggcctgcgatttgtccgagcaagagattaaaaccatc
agcagttactatcaggccacccattccctggatgcggcgataggtgacgacgacgataac
ctggaattgatggcaaaaatgcagcagcatcaattcagtctgccactcgatgaactaatt
gatcaggatctggctcaatatgtcgacaaagcagttgcttcgctaccggaaaaacaggcg
gcgattttaaccatgcgtttcggtctgcgcgatcacacggaaatgaccttgcaggcggta
gcggatcagctgcatgttactcgggagagagtcaggcaaattcaaaatgaagctttaaaa
aaattgaaacaacaatttggctttgaccttatgctatttctcgaacccaaggatggctaa
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