KEGG   Methylomonas denitrificans: JT25_018305
Entry
JT25_018305       CDS       T04191                                 
Name
(GenBank) RNA polymerase subunit sigma-32
  KO
K03086  RNA polymerase primary sigma factor
Organism
mdn  Methylomonas denitrificans
Pathway
mdn02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:mdn00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    JT25_018305
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mdn03021]
    JT25_018305
Transcription machinery [BR:mdn03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     JT25_018305
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r3 Sigma70_r4_2 HTH_Tnp_ISL3
Other DBs
NCBI-ProteinID: AMK78419
UniProt: A0A126T8J7
LinkDB
Position
complement(3976838..3978097)
AA seq 419 aa
MSNLAALPIDSEMDSVTESQPNSLAVQVEQARQTLLELLLENKQTNALIINRFLHDLNSG
VDCSDLIVAKNSEDYKRLLQLLVNSQAASRNNQVVSNENNGQDKVVQADNVVQLMGSEFA
QQSLIARSVNRLLYSLHLLPVFLLDSAAQADGVLSADTEDSADFKKRLGKAKRELRSLRQ
QMISANTGLVAFVAHKYKTSNLSFEDLMQEGLVGLIKAVDRFDPDRGICFSTYAIYWIRQ
AISRLIVKQEKIVRLPVALAEKSATVFEAMRTCYLKYERWPSIAELKMACDLSEQEIKTI
SSYYQATHSLDAAIGDDDDNLELMAKMQQHQFSLPLDELIDQDLAQYVDKAVASLPEKQA
AILTMRFGLRDHTEMTLQAVADQLHVTRERVRQIQNEALKKLKQQFGFDLMLFLEPKDG
NT seq 1260 nt   +upstreamnt  +downstreamnt
atgtccaacttagccgcattgccaatcgatagcgagatggattcagtaacagaatcccaa
cccaactcacttgccgttcaagttgaacaggccaggcagactctcttagagttattgctg
gaaaacaagcagaccaacgccttgataattaacagatttttgcacgacctcaattcgggt
gtggactgctcggacctgatcgtcgccaagaactcagaagactataaaaggctgctgcaa
ttgctggtcaacagccaggcggcaagcagaaacaatcaagtagtttcgaatgagaataac
ggacaggacaaagttgtacaagctgataatgttgtacaacttatgggttcggaatttgcg
cagcaatccctgattgctcgctcggtcaaccgtttgttgtacagcctgcatttattgccg
gtatttttactggacagcgcggcgcaagcggacggcgtattgagcgccgacaccgaggac
agcgcggacttcaaaaaacgtctgggtaaagccaaacgcgaattaagaagcttgcgccag
caaatgatttccgccaacaccggcttggtggcgttcgtggctcacaagtacaaaaccagt
aatctgagctttgaagatttgatgcaggaaggtttggtgggcttaattaaagcggtggac
agattcgatccggatcggggtatctgtttttccacttatgccatttattggatcagacaa
gccatctcgcggctgatagtcaaacaagaaaaaattgtgcgtttgccggtggctttggcc
gaaaaatccgccacagtattcgaggccatgcgtacttgctaccttaaatatgagcgctgg
ccgagcatagccgaattaaaaatggcctgcgatttgtccgagcaagagattaaaaccatc
agcagttactatcaggccacccattccctggatgcggcgataggtgacgacgacgataac
ctggaattgatggcaaaaatgcagcagcatcaattcagtctgccactcgatgaactaatt
gatcaggatctggctcaatatgtcgacaaagcagttgcttcgctaccggaaaaacaggcg
gcgattttaaccatgcgtttcggtctgcgcgatcacacggaaatgaccttgcaggcggta
gcggatcagctgcatgttactcgggagagagtcaggcaaattcaaaatgaagctttaaaa
aaattgaaacaacaatttggctttgaccttatgctatttctcgaacccaaggatggctaa

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