Monodelphis domestica (gray short-tailed opossum): 100011840
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Entry
100011840 CDS
T01031
Symbol
CNOT1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100011840 (CNOT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdo03019
]
100011840 (CNOT1)
Messenger RNA biogenesis [BR:
mdo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100011840 (CNOT1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
100011840 (CNOT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
100011840
NCBI-ProteinID:
XP_001363026
Ensembl:
ENSMODG00000014199
UniProt:
F6TR11
LinkDB
All DBs
Position
1:709359281..709454814
Genome browser
AA seq
2376 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECASLITKPNFISTLSYAIDNPLHYQKSLKPSPHLFAQLSKVLK
LSKVQEVIFGLALLNSSSSDLRGFAAQFVKQKLPDLLRSYIDADVSGNQEGGFQDIAIEV
LHLLLSHLLFGQKGAFGVGQEQIDAFLKTLRRDFPQERCPVVLAPLLYSEKRDILMDRIL
PDSGGIAKTMMESSLADFMQEVGYGFCASVEECRNIIMQFGVREVTAAQVARVLGMMART
HSGLTDGIPLQAISAPGSGIWSDGKDKSDGTQAHTWNVEVLIDVLKELNPSLNFKEVTYE
LDHPGFQIRDSKGLQHVVYGIQRGLGLEVFPVDLIYRPWKHAEGQLSFIQHSLINPEIFC
FADYPCHTVATDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHC
PDMLVLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
AMAEWYMRGEQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSAQLPPETLATMLACLQACAG
SVSQELSETILTMVANCSNVMNKARQPPPGVMPKGRPPSASSLDAISPVQIDPLAGMASL
SIGGSAAPHTQSMQGFPPNLGSAFSTPQSPAKAFPPLSTPNQTTAFSGIGGLSSQLPVGG
LGTGSLTGIGTAALGLPAVNNDPFVQRKLGTSGLNQPTFQQSKMKPPDVSQVWPEANQHF
SKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSNIKREREVFNCMLRNLFEEYR
FFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPYESKMYFFGIAALDR
FKNRLKDYPQYCQHLASISHFMRFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSIALAQA
QAQAQVPAKAPLAGQVSTIVTTSTTTTVAKTITITRPTGVSFKKDVPPSINTTNIDTLLV
ATDQTERIVEPPENVQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVS
IEPNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLG
MITLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSVRSVVFRPPNPWTM
AIMNVLAELHQEHDLKLNLKFEIEVLCKNLSLDINELKPGSLLKDKDRLKNLEEQLSAPK
KDIKQPEALPPITTTTTSTTPATSTTCTATVPPQPQYSYHDINVYSLGGLAPHITLNPTI
PLFQAHPQLKQCVRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSEESRMRIA
AHHMMRNLTAGMAMITCREPLLMSIATNLKNSFATALRAASPQQREMMEQAAAQLAQDNC
ELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPVVLTYQAERMPEQIRLK
VGGVDPKQLAVYEEFARNVPGFLPTNDLTQPTGFLAQPMKQAWATDDVAQIYEKCITELE
QHLHAIPPALAMNPQSQALRSLLDAVVMSRNSRDAIAALGLLQKAVEGLLDATSGADADL
LLRYRECHLLVLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVNMQ
QYDLHLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHVTEADLFHTIETLMRINAHSRG
NAPEGLPQLMEVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPPGLREKAEYLLREWV
NLYHSAAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFFRLCTEMCVEISYRAQAEQQHN
PAANPTMIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGVLLQDHDV
RQNEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAPGFVYAWLE
LISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELSKPMQILYKGTLRVLL
VLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKVDMLSEINI
APRILTNFTGVMPPQFKKDLDSYLKTRSPVTFLSDLRSNLQVSNEPGNRYNIQLINALVL
YVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNAIANQLRYPNSH
THYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPAFKFWNH
EFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7131 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggccttgtctcaaatcagctacctggtggacaattta
accaagaaaaactaccgagccagccagcaggaaatacagcatattgtgaatcgacacggc
ccggaggcagataggcatttattacgctgcctattttctcatgtggatttcagtggcgat
ggtaaaagtagcggcaaagattttcatcagactcagtttctgattcaggagtgtgcatca
ctgattacaaagccaaattttatctcgacgctgtcctatgccattgataatccattgcac
tatcagaagagtctaaagccttcaccccacttatttgcccagctgagtaaagttctcaag
ttaagcaaggttcaagaggtaatttttggtcttgctctcttgaattcttccagctcagat
ctgcgaggttttgctgcccaatttgtcaaacagaagctcccagatcttctgcgctcttac
attgacgcagacgtcagtgggaatcaagaaggtggcttccaagacatcgccatagaggtc
ctgcacctcctcctctcccatctcctttttgggcagaagggagcttttggggttggacag
gaacagatagacgcttttcttaagacactgcgtagagattttccccaggaacgttgtcct
gtggtgcttgcaccactactttactctgaaaaacgggacattctaatggacaggatcctg
cctgattctggagggatagctaaaaccatgatggagagctctctggcagacttcatgcaa
gaagtaggctatggcttctgtgcaagtgttgaagaatgtcgcaatataatcatgcagttt
ggtgttcgagaagtcacagctgctcaggttgccagggttttgggaatgatggctcggact
cattcagggttaacagatggcattccattacaagctatctcagctcctggaagtggaata
tggagtgatggaaaagataaaagtgatggcactcaggcccatacctggaatgtcgaagtc
ttgattgatgttctcaaagagttgaacccaagtttgaatttcaaggaagtaacttatgaa
ttagaccaccctggatttcaaattcgtgacagcaaaggacttcagcacgtggtgtatggc
attcagagaggtctaggactggaagtcttcccagtggaccttatttataggccttggaaa
catgcagagggccagctctccttcattcagcattcactgataaatccagagatcttctgt
tttgctgactatccctgtcatacagttgccactgatatcctcaaagcaccaccagaggat
gacaatcgagaaatagccacatggaagagcctggacttgattgaatctctcttgcgactg
gcagaggtggggcagtatgagcaggtcaaacagctcttcagctttcccatcaagcactgt
ccagatatgttggtattggccttactacagatcaacacttcttggcacacattgcgccat
gaactcatctccaccctgatgccaattttccttggaaatcatcccaactctgccattatt
ttgcactatgcctggcatgggcagggacagtctccctcgattcgccagctcatcatgcac
gccatggccgagtggtatatgcggggggaacagtacgaccaagccaagttgtcccgaatt
cttgatgtggcccaggacttgaaggccttgtcaatgctgctaaatggtactccatttgcc
tttgttattgaccttgctgcacttgcctctcgccgggaatacctcaaacttgacaaatgg
ctcacagataaaattcgggagcatggggagcccttcatccaggcctgtatgactttctta
aagagacggtgcccttccatcttgggcggccttgccccagagaaagatcagcctaaaagt
gctcaacttcctccagaaacactggcaacgatgttggcttgtctacaagcttgtgcaggg
agtgtttctcaagagttgtcagagactatcctgacaatggttgccaattgcagtaatgtt
atgaataaggcacgacaaccaccaccaggagttatgccaaaaggacgtccccctagtgca
agcagcttagatgccatttctcctgtacagattgacccccttgccgggatggcatctctt
agtataggaggttcagctgccccccacacccagagtatgcagggttttcctccaaatttg
ggttctgctttcagtactccacagtcaccagctaaagcctttccacccctttccactcca
aatcagactacagctttcagtggtattggaggactctcttcgcagcttccagtaggtggt
cttggcacaggcagcctgactggtataggaactgcggctctgggactccctgcagtgaat
aatgatccgtttgtgcagagaaagctgggcacctccggactgaaccaacctacattccag
cagagtaagatgaaacctccggacgtatctcaggtgtggccagaggcgaaccagcacttt
agtaaagagatcgatgatgaagcaaacagctattttcagcgcatctataatcatccacca
catcctaccatgtctgttgatgaggtattagaaatgttacagaggtttaaggactccaat
attaaaagggaacgagaagtgtttaattgcatgctgaggaacttgtttgaagaatatcgg
tttttcccccagtaccctgataaagagctgcacataacagcctgcctatttggtgggatc
atagaaaaaggactggttacctacatggcacttggcctggccctgcgctatgttcttgaa
gccttacgcaagccttatgaatccaaaatgtatttttttgggatcgctgcactagataga
tttaaaaataggttgaaggactatccccagtactgtcagcacttggcctccattagtcac
tttatgcggtttcctcatcacctacaggagtacattgaatatggacagcaatctagagac
cctcctgtgaaaatgcagggttccatcaccacccctggaagtattgcacttgcccaggcc
caggcccaggcccaggttccagcaaaagctcctcttgctggtcaagtcagcactatcgtg
accacttcaacaactaccactgtggccaaaaccatcacaatcaccaggcccaccggtgtt
agcttcaagaaggatgtgccaccgtctattaatactacaaatattgatacattgctggtg
gccacggaccaaactgagagaattgtggagcctccagaaaatgtccaggaaaaaattgct
ttcatcttcaacaacctttctcagtcaaacatgacccagaaggttgaggagctgaaggaa
acggtgaaagaggagtttatgccttgggtttcacaatatcttgtcatgaagagagtcagt
attgagccgaactttcacagcctgtattcaaatttccttgatactctgaagaatcctgaa
tttaataagatggttctgaatgagacctacagaaatatcaaagtacttctgacatcagat
aaagctgcagccaacttctcagaccgctccttgttgaagaacctgggccactggctgggg
atgatcacactagccaaaaacaaacccatcttgcacacagacttagatgtaaaatctttg
ctgttggaagcttatgttaaaggacagcaggaattgttgtatgtggtgccctttgttgcc
aaagtcttagaatccagtgttcggagtgtggtttttaggccaccaaatccttggacaatg
gccattatgaatgtactagctgaacttcaccaagaacatgatttaaagttaaacttgaag
tttgagattgaggtgctctgcaagaatctttctctggacatcaatgagttaaaacctgga
agcctcctgaaagacaaagacagactgaaaaacttagaagagcagctctctgcccccaaa
aaggacatcaaacaaccagaggcacttcctcccatcacaaccaccactacttctaccaca
ccagctaccagcaccacttgtacagctactgttcctccacagcctcaatacagttaccat
gacatcaatgtctattcgttgggaggtctggcaccacacattactttgaaccccacgatt
ccattgtttcaggcccatccacaattgaaacaatgtgtacgtcaagctatcgaacgtgct
gtccaagaacttgttcacccagtggtggatcggtcaattaagatcgccatgacaacttgt
gagcagattgtcagaaaagactttgcattggactcagaggagtcacgcatgcggatagca
gctcatcacatgatgaggaatcttacggctggcatggctatgataacttgcagggagcct
ttactcatgagcatagctaccaacttgaaaaatagcttcgccacagcactacgagctgca
tccccccagcagagggaaatgatggagcaggcagcagcccagctagcccaggacaactgt
gaattggcctgctgctttattcagaagactgcggtagaaaaagcaggtccagagatggac
aagaggctagcaactgaatttgaacttcgaaagcacgcaaggcaggaggggcgcaggtac
tgtgatcccgttgttttgacgtaccaagcggagcggatgccagagcagatcagactgaag
gttggtggtgtagacccaaaacagctggctgtttatgaagagtttgcacgcaatgttcct
ggcttcttgcccaccaatgatttaactcaacctacaggatttttagctcagcctatgaag
caagcgtgggctactgatgatgtagcacagatctatgaaaagtgtatcacagaactggag
cagcacctgcatgctatccctccagccttggccatgaacccccagtctcaggctcttcgg
agccttctggatgctgtcgtcatgtctcgcaactctcgtgatgccattgctgccctgggc
ttgctgcagaaggctgtagagggcttgctagatgccacaagtggtgcagatgctgacctg
ctgctacgttaccgggagtgtcacctcctcgtactgaaagcattacaggatggccgtgca
tatgggtctccatggtgtaacaaacagatcacaaggtgcctgattgagtgtcgggatgag
tataagtataatgtggaagctgtggagctgttgattcgcaatcatctagttaatatgcaa
cagtatgatcttcacctggctcagtcaatggagaatggtttgaactacatggctgtagcc
tttgctatgcagttggtgaagatccttttggtggatgaaaggagtgtggcccatgtgact
gaggctgatctttttcataccattgagacactaatgaggatcaatgctcactcccgagga
aatgccccagaagggttgccccagctgatggaagtggtgcggtcgaattatgaggccatg
attgaccgtgcacatgggggccccaacttcatgatgcactcgggcatctcacaggcctct
gagtatgacgatcccccaggcctgcgggagaaggcggagtacttgctgcgggagtgggtg
aacctataccactcagcagcggctggccgcgacagcaccaaagccttctctgcgtttgtt
ggacagatgcaccagcaaggaatcctgaagactgatgacctcataacaaggttttttcgc
ctgtgcactgaaatgtgtgttgaaatcagctaccgggctcaggctgagcagcagcacaat
cctgctgctaacccaacaatgatccgggccaagtgttaccataatctggatgcctttgtg
cggctcattgcactgttggtcaagcactcaggggaagccactaacacagtcaccaagatc
aacctgttaaacaaggttcttggtatagtggtaggtgtccttctgcaggatcatgatgtt
cgacaaaatgagtttcagcaacttccctaccaccggatcttcatcatgctgctcttagaa
ttaaatgctcctgaacatgtgttggaaaccattaattttcagacactgacagctttctgc
aatacattccacatcttgaggcccactaaagccccaggctttgtgtatgcctggcttgaa
ttgatctcacatcggatatttattgcaagaatgctggcacatacaccacagcagaagggc
tggcctatgtatgcccagctgttgattgatttattcaagtatttagcccccttccttaga
aatgtggaactcagcaaacctatgcaaatcctctataagggtactttacgagtgctgctg
gtcctcctgcacgattttccagaatttctttgtgattaccactatggattctgcgatgta
atcccgcccaattgcatccaattacggaatctgatcctgagtgcctttccacgaaacatg
aggctaccagacccattcactcccaatctgaaggtggacatgttgagtgaaatcaacatc
gctcctcgcatcctcactaacttcactggagtgatgcctcctcagttcaaaaaggatttg
gattcctatcttaagactcgatcgccagtcactttcctgtctgatttacgcagtaaccta
caggtatcaaatgaacctggcaatcgctacaacatccagctgataaatgcactggtgctc
tacgtcggtactcaggccatcgcccatatccacaacaaaggcagcacgccgtccatgagc
accatcactcactcggcgcacatggacatcttccagaacttggctgtggacctagacaca
gaaggtcggtacctcttcttgaatgcaattgccaatcagctgcggtatccaaacagccac
actcactacttcagttgtaccatgctgtacctttttgcagaggccaacactgaagctatc
caggaacagatcaccagggttctcttggaacggttgattgtaaataggccacatccttgg
ggtcttcttattaccttcattgagctgattaaaaatccggcgtttaagttctggaaccac
gagtttgttcactgtgccccagaaatcgaaaagttgttccagtcagttgcacaatgctgc
atgggacagaagcaggctcagcaagtgatggaaggaactggtgccagttag
DBGET
integrated database retrieval system
