Monodelphis domestica (gray short-tailed opossum): 100016409
Help
Entry
100016409 CDS
T01031
Symbol
SCN2A
Name
(RefSeq) sodium voltage-gated channel alpha subunit 2
KO
K04834
voltage-gated sodium channel type II alpha
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo04742
Taste transduction
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09150 Organismal Systems
09157 Sensory system
04742 Taste transduction
100016409 (SCN2A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mdo04040
]
100016409 (SCN2A)
Ion channels [BR:
mdo04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
100016409 (SCN2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
IQ
GPHH
ATP-synt_B
IQCJ-SCHIP1
Neur_chan_memb
HB_ELP1
K_channel_TID
Motif
Other DBs
NCBI-GeneID:
100016409
NCBI-ProteinID:
XP_001367197
Ensembl:
ENSMODG00000006436
LinkDB
All DBs
Position
4:173599618..173746939
Genome browser
AA seq
2007 aa
AA seq
DB search
MAQSVLVPPGPDSFRYFTRESLAAIEQRIAEEKATKPKQGRKDEDDENGPKANSDLEAGK
SLPFIYGDIPPGMVSEPLEDLDPYYINKKTFIVLNKGKAIFRFSATSALYILTPFNPIRK
IAIKILVHSLFSMLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKILARGFC
LEGFTFLRDPWNWLDFTVITFAYVTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPDNSTFEINITSYFNSSW
DGNGTYYNKTVSMFNWDDYIEDRSHFYILEGQNDALLCGNSSDAGQCPEGYICVKAGRNP
NYGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLI
LAVVAMAYEEQNQATLEEAEQKEAEFQQMLEQLKKQQEEAQAAAAAASAESREFSGGGGV
GGFSESSSEASKLSSKSAKERRNRRKKRKQKEQSGEEEKQEEEFHKSESEDSIRKKGFRF
SIEGNRLTYEKRFSSPHQSLLSIRGSLFSPRRNSRTSIFSFRGRAKDIGSENDFADDEHS
TFEDNDSRRDSLFVPHRHGERRHSNVSQASRSSRVLPILPVNGKMHSSVDCNGVVSLVGG
PSALTSPTGQLLPEGTTTETEIRKRRSSSYHVSIDLLEDPSGRQRAMSIASILTNTMEEL
EESRQKCPPCWYKFANTCLIWDCCEPWLKVKHIVSLIVMDPFVDLAITICIVLNTLFMAM
EHYPMTEQFSGVLYVGNLVFTGIFTAEMFLKIIAMDPYYYFQEGWNIFDGFIVSLSLMEL
GLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALRKPDLVLAIIVFIFAVV
GMQLFGKSYKECVCKISNDCELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQTM
CLTVFMMVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAVGRMQKGIDYVK
RKLREFIQKAFVRKQKALDEVKPLEDLNNKKDSCISNHTTVEIGKDLNYLKDGNGTTSGI
GSSVEKYVIDESDYMSFINNPSLTVTVPIAVGESDFENLNTEEFSSESDLEESKEKLNAS
SSSEGSTVDVGAPAEGEQPEVEPEETLEPEACFTEGCVRKFKCCQVSIEEGRGKLWWNLR
KTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILEML
LKWVAYGFQMYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALS
RFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCINTTTGEMFDIS
VVNNLSECQALIDSNQTARWKNVKVNFDNVGLGYLSLLQVATFKGWMDIMYAAVDSRNVE
WQPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYY
NAMKKLGSKKPQKPIPRPANKFQGMVFDFVTRQVFDISIMILICLNMVTMMVETDDQSQE
MTNILYWINLVFIVLFTGECVLKLISLRYYYFTIGWNIFDFVVVILSIVGMFLAELIEKY
FVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFG
MSNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSGPPDCDPEKDHP
GSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPLSEDDFEMF
YEVWEKFDPDATQFIEFCKLSDFAAALDPPLLIAKPNKVQLIAMDLPMVSGDRIHCLDIL
FAFTKRVLGESGEMDALRIQMEERFMASNPSKVSYEPITTTLKRKQEEVSAIIIQRAYRR
HLLRQKVKKVSCIYKKDKSKEGNGLPIKEDMIIDKLNDNSTPEKTDVTPSTTSPPSYDSV
TKPEKEKYEKDKTEKEDKGKDVRESKK
NT seq
6024 nt
NT seq
+upstream
nt +downstream
nt
atggcacaatcagtgctggtaccaccaggacctgacagctttcgctacttcaccagggaa
tcccttgctgctattgagcaacgtattgcagaagaaaaagctacaaaacccaaacaagga
cgaaaggatgaggatgatgaaaatggccccaaagcaaatagtgatttggaagcaggaaaa
tccctcccatttatttatggagacattccacccggaatggtgtcagagcccttggaggac
ctggatccatactatatcaataaaaaaacttttatagtattgaataaagggaaggcaatc
ttccgattcagtgccacatctgccctgtacattttaactcctttcaaccctattagaaaa
atagctataaagattttggtacattctttattcagcatgctcattatgtgtactattctg
accaattgtgtgtttatgaccatgagtaaccctccggactggacaaagaatgtagagtac
acattcacaggaatttatacttttgaatcacttataaaaattcttgcaaggggcttctgt
ttagaaggattcacttttcttcgggacccctggaactggcttgatttcactgtcattact
tttgcgtatgtaacagaatttgtaaacctaggcaatgtttcagctcttcgaactttcaga
gtcttgagagctttgaaaactatttctgtaatcccaggattaaagactattgtgggagct
ctgatccaatcagtgaagaaactttctgatgtcatgatcctgactgtgttttgcctgagt
gtatttgcactcattgggctccagctgttcatgggcaacctgaggaataaatgtttgcaa
tggcccccagataactctacctttgaaataaacattacttcctactttaatagctcatgg
gatggaaatggtacctattataataagacagtgagcatgtttaactgggatgactacatt
gaggacagaagtcatttttacattttggaagggcaaaatgatgcattgctttgtggtaac
agctctgatgcaggccagtgtccagaaggatatatatgtgtgaaagctggcagaaaccct
aactatggctacacaagctttgacaccttcagttgggctttcttgtccctatttcgactg
atgacgcaggacttctgggaaaatctttatcaactgacacttcgtgcagctggcaagaca
tacatgatcttttttgtcctggttattttcttgggctctttctaccttataaacttgatc
ctggctgtggttgctatggcctatgaggaacaaaatcaagccaccttggaggaggcagag
cagaaggaggctgagtttcagcagatgttggaacaacttaagaaacaacaggaagaagct
caggcagccgcagcagcagcatctgcagaatcaagagaatttagtggaggtggcggggta
ggaggcttctcagagagctcttccgaagcatcaaagttgagctcaaaaagtgcaaaagaa
aggaggaaccggagaaagaaaagaaaacagaaagaacagtctggagaagaagagaaacaa
gaagaggaattccacaaatctgaatcagaagatagtatcagaaagaaaggttttcgtttt
tccatcgaaggaaatcgcctgacctatgaaaagaggttctcttctccccaccagtcttta
ttgagcatccgtggctctcttttttctccaagacgcaacagccggaccagcattttcagc
ttcaggggtcgagcaaaagatattggctctgaaaatgactttgctgatgatgagcacagt
acttttgaagacaatgatagtagaagagattccctgtttgttccacacagacatggagaa
cgacgccacagtaatgttagtcaggctagccggtcatctcgggtgctgcccatattgcca
gtgaatgggaaaatgcacagctcagtggattgtaatggtgtggtttctctggttggtgga
ccttcagccctgacatcaccaactggacaactcctgccagagggcaccactacagaaaca
gaaataagaaagagacgatctagttcttatcatgtgtccatagatttgctagaagaccct
tctggaaggcaaagagcaatgagtatagccagtatacttaccaacacaatggaagaactt
gaagaatccagacagaaatgcccaccatgctggtataaatttgctaacacatgtttgatc
tgggattgctgtgaaccatggctcaaagtaaagcacattgtcagtctcattgtgatggac
ccatttgttgacctggcaattaccatctgcattgtcctgaatacactcttcatggccatg
gaacattatcctatgactgaacagtttagtggggttctttatgtaggaaacctggttttt
actggaatcttcacagcagaaatgtttctcaagataattgccatggatccttattattat
ttccaagaaggctggaatatttttgatggttttattgtcagccttagtttaatggaactt
ggcctggcaaatgtggaaggattatctgtcctccgatcattcagactgcttcgagttttc
aagttggcaaaatcatggcctacattgaacatgttgataaaaatcattggtaactccgtg
ggggctctgagaaaacctgaccttgtgttggccatcattgtcttcatttttgctgtggtt
ggcatgcagctttttggcaagagctacaaagaatgtgtctgcaagatctccaatgactgt
gaacttccacgctggcacatgcatgacttcttccattccttcctgattgtgttccgggtg
ctttgtggagaatggatagagactatgtgggactgtatggaggtggcaggtcaaaccatg
tgccttactgtcttcatgatggttatggtgattgggaacctagtggtcctgaacctgttt
ctggccttgctgttaagctcctttagttcagacaaccttgctgccacagatgatgacaat
gaaatgaacaatctccagattgctgtgggaaggatgcagaaggggatagattatgtgaaa
agaaaattacgtgaatttattcagaaagcttttgttagaaaacagaaagctttggatgaa
gtcaaaccacttgaggatttgaacaataagaaagatagctgtatttctaaccataccaca
gtagaaataggcaaagatctgaattatcttaaagatggaaatgggacaaccagtggaata
ggcagcagtgttgaaaaatatgttattgatgaaagtgactacatgtcattcataaacaac
cccagcctcactgtaacagtcccaattgctgttggagaatctgactttgagaatttgaat
acagaagaattcagcagtgaatcggatctagaagaaagcaaagagaagttaaatgcatct
agttcatctgaaggtagtacagtggatgtaggagcccctgcagaaggagaacagcctgaa
gtagagcctgaagaaaccctggaaccagaagcctgcttcacagaaggctgtgtacggaag
ttcaaatgttgtcaggtcagcatagaagagggcagaggaaaactctggtggaacttaaga
aaaacttgctataagatagtagaacataactggtttgagaccttcattgtcttcatgatt
ctcctaagtagtggtgctctggcctttgaagacatatatattgaacaacgaaaaacaatt
aagacaatgttggaatatgctgacaaggttttcacatacattttcattctggaaatgctt
ctcaagtgggttgcatatggtttccaaatgtattttactaatgcatggtgctggctggac
tttctgattgttgatgtctctttggttagcttaactgcaaatgccttgggctactcggag
ctgggtgccatcaaatctctacgaacactaagagctttgagacccctaagagccttatct
cggtttgaagggatgagggtggtcgtgaatgcccttttaggtgcaatcccctctatcatg
aatgtacttctggtgtgtctaatattttggctaatattcagcatcatgggagtaaatctt
tttgctggcaagttttatcactgcattaacaccactactggagagatgtttgacataagt
gttgtcaacaatttgagtgaatgccaggcccttatagatagtaatcaaacagcccgatgg
aaaaatgtgaaagtaaactttgataatgtgggacttggatacctttccttgttacaagtg
gctacatttaaaggatggatggatatcatgtatgcagctgttgattcaagaaatgtagag
tggcaacccaagtatgaagacaatctatacatgtatctttattttgtcatctttattatt
tttgggtcgttcttcactctgaatctcttcattggtgtcatcatagataacttcaaccaa
cagaaaaagaagtttggaggtcaagatatctttatgacagaagaacaaaagaaatactac
aatgccatgaaaaaactaggctccaagaaaccacaaaaacctatacctcgacctgcgaat
aaattccagggaatggtctttgattttgtaaccagacaagtctttgatatcagcatcatg
attctcatctgcctcaacatggtcaccatgatggtggagactgatgatcagagtcaagaa
atgactaacattctttattggattaatttggtgttcattgtcctcttcactggagaatgt
gtgctgaaactgatatctctccgctactattatttcaccataggctggaacatttttgat
tttgtggtggtcattctctccattgttggtatgtttctagcagagctgatagaaaaatat
tttgtgtcccctaccctcttccgtgtaatccgtcttgccaggattggacgaatcctccgt
cttatcaaaggagcaaagggtatccgtacacttctctttgctttgatgatgtccctccct
gctctgtttaacattgggctcctgctcttcctggtcatgtttatctatgccatctttgga
atgtccaacttcgcttatgtcaagagggaagttggaatcgatgacatgttcaactttgag
acctttggcaacagcatgatctgcctcttccaaattaccacatcagctggttgggatggt
ttgcttgcacccattcttaacagtggacccccagactgtgaccctgaaaaagatcaccct
ggaagctcagtcaaaggagattgtggcaacccctctgttgggattttcttttttgtcagt
tatatcatcatctcattcctggtggtggtaaacatgtacatcgctgtaatcctggagaac
ttcagtgttgctactgaagaaagtgctgagccactgagtgaagatgactttgagatgttc
tatgaggtttgggagaagtttgatccagatgctacccagttcattgaattctgtaagctc
tctgattttgcagccgccctcgatccacctcttcttatagcaaaaccaaacaaggtccaa
ctcatagccatggacctgcccatggtaagtggggaccgaattcactgccttgacatctta
tttgcttttacaaagcgtgtcttgggtgagagtggagagatggatgctctccgaatacag
atggaagagcggttcatggcttctaatccttccaaagtctcttatgagccaatcaccacc
actctgaaacgcaaacaagaggaagtgtcagcaattatcattcagcgggcttaccggcgt
cacctcttgaggcaaaaagttaaaaaagtttcatgtatatataaaaaagacaaaagtaaa
gaaggcaatggactgcctatcaaagaagatatgataattgataaactgaatgataattcc
accccggagaaaactgatgtgaccccttccaccacctctccaccttcctatgatagtgta
acaaaacctgaaaaggaaaaatatgaaaaagacaaaacagaaaaggaagacaaagggaaa
gatgtcagggaaagcaaaaagtaa
DBGET
integrated database retrieval system
