Monodelphis domestica (gray short-tailed opossum): 100027072
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Entry
100027072 CDS
T01031
Symbol
PUM1
Name
(RefSeq) pumilio RNA binding family member 1
KO
K17943
pumilio RNA-binding family
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
100027072 (PUM1)
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Gene cluster
GFIT
Motif
Pfam:
PUF
PUF_NOP9
DUF6922
SAWADEE
CFAP61_N
Motif
Other DBs
NCBI-GeneID:
100027072
NCBI-ProteinID:
XP_001367437
Ensembl:
ENSMODG00000017067
LinkDB
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Position
4:431093951..431256036
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AA seq
1188 aa
AA seq
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MSVACVLKRKAVLWQDSFSPHLKQHTQETANPNMPVVLTSGTAGSQAQQQPAANPALAAG
THSSPVPGSIGVAGRSQDDAMVDYFFQRQHGEQLGGGGSGGGGYNNSKHRWPTGDNIHAE
HQVRSMDELNHDFQALALEGRAMGEQLLPGKKFWETDDSSKDGPKGIFLGDQWRDSAWGT
SDHSVSQPIMVQRRPGQSFHVNSEVNSVLSPRSESGGLGVSMVEYVLSSSPGDSCLRKGG
FGPRDADSDENDKGEKKNKGTFDGDKLGDLKEEGDVIDKTNGLPVQNGIDADVKDFSRTP
GNCQNSANEVDLLGPNQNGSEGLAQLTSTNGAKPVEDFSNMESQSVPLDPMEHVGMEPLQ
FDYSGTQVPVDSGAATVGLFDYNSQQQLFQRPNALAVQQLTAAQQQQYALAAAAHQPHIG
LAPAAFVPNPYIISAAPPGTDPYTAGLAAAATLGPAVVPHQYYGVTPWGVYPASLFQQQA
AAAAAASNSASQQTTQQTQQGQQQVLRGGASQRPLTPNQNQQGQQTDPLVAAAAVNSALA
FGQGLAAGMPGYPVLAPAAYYDQTGALVVNAGARNGLGAPVRLVAPAPVIISSSAAQAAV
AAAAASANGAAGGLAGTTNGPFRPLGTQQPQPQPQQQPNSNLASSSFYGNNSLSSNSQSS
SLFSQGSAQPANTSLGFGSSSSLGATLGSALGGFGTAVANSNTGSGSRRDSLTGSSDLYK
RTSSSLTPIGHSFYNGLGFSSSPGPVGMPLPSQGPGHSQTPPPSLSSHGSSSSLNLGGLT
NGSGRYISAAPGAEAKYRSASSASSLFSPSSALFPSSRIRYGLSDVMPSGRSRLLEDFRN
NRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFG
NYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPPDQQNEMVRELD
GHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCL
PEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFA
SNVVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRK
IVMHKIRPHIATLRKYTYGKHILAKLEKYYMKNGVDLGPICGPPNGII
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttgcatgtgttttgaagagaaaagcagtgctctggcaggactccttcagcccc
cacctgaaacagcacacgcaagaaacagctaatcccaacatgcctgttgttttgacatct
ggaacagcagggtcccaggcacagcaacagccggctgcaaacccggcgcttgcagcaggg
actcactcgagcccggtcccaggatccataggggttgcgggccgctcccaggacgacgcc
atggtggattacttctttcagaggcagcatggtgagcagcttgggggaggaggaagtggt
ggcggcggctataataacagcaaacatcgctggcctactggggataacattcatgcagag
caccaggtacgatctatggatgaactgaaccatgattttcaagcacttgctttagaggga
agagccatgggagagcagctcttgccaggtaaaaagttttgggaaacagatgattccagc
aaagatggaccaaaaggaatattcctgggtgatcaatggcgggacagtgcctggggaaca
tcagatcattcagtttcccagcccatcatggtgcagagaagacctggtcagagtttccat
gtgaacagtgaggtcaattctgtattgtccccacggtcggagagtggaggactaggagtt
agcatggtggaatatgtattgagttcatcccctggtgattcctgtttaagaaaaggagga
tttggcccaagggatgcagacagtgatgaaaacgacaaaggtgaaaagaagaacaagggt
acatttgatggagataagctaggagatttgaaggaggagggtgatgtgattgacaagacc
aatggtttaccagtacagaatgggattgatgcagacgtcaaagattttagccgtacccct
ggtaattgccagaactctgctaatgaagtggatcttctgggtccaaaccagaatggttct
gagggcttagcccagctgaccagcactaatggtgccaagcctgtggaggatttctccaac
atggagtcccagagtgtccccttggaccccatggagcatgttggcatggagcctcttcag
tttgattattcaggcacccaggtacctgtggactcaggagcagcaactgtgggactcttt
gactacaattctcaacaacagctcttccaaagaccgaatgcccttgctgttcaacagctc
acagctgcccaacaacaacagtatgccctggcagccgccgcccatcagcctcacataggt
ttagctcccgccgcgtttgtccccaatccatacatcatcagtgccgcgccaccagggacg
gatccttacacggcgggattggctgcagcagcaactctaggccctgctgttgtccctcac
cagtattatggagttactccctggggagtctatcctgccagtcttttccagcagcaagct
gctgcggctgcggctgcaagcaattcagctagccaacagaccactcagcagactcagcaa
gggcagcagcaggttcttcgtggaggtgccagccaacgccctttgaccccaaatcaaaac
cagcaaggccagcaaactgatccactagtggctgctgctgcagtaaactctgctcttgca
tttgggcaggggttggctgcagggatgccagggtatcctgtcttggcaccagctgcttat
tatgaccagactggggcccttgttgtcaatgctggggctaggaatggcctgggagctcct
gtccgcctcgtggcccctgcccccgtcatcatcagctcctcagcagcgcaagcagctgtc
gcagccgcagcagcttctgcaaatggtgcggctggtggtcttgcaggcacgacaaatgga
ccattccgcccattgggaactcagcagcctcagccccagccccagcagcaacccaacagc
aacttggcgtccagttcattttatggcaacaactctctgagcagtaattcccaaagtagc
tccctcttttctcagggctctgcccaacctgccaacacatcccttggattcgggagcagc
agctctcttggagccactctggggtcagctcttggaggatttggaactgcagtggcaaac
tcaaatactggtagtggctcccgccgagactccctgactggcagcagtgacctatataag
agaacatccagcagtttgacccccattggacacagtttttataatggccttggcttttct
tcctctcctggacctgtcggaatgcctctccctagtcaggggccagggcattcccagaca
ccacctccttctctctcttcacatggatcttcttcaagtctgaacctgggagggcttacc
aatggcagcggaagatacatctctgcggctcctggagctgaagccaagtaccggagtgca
agcagcgcgtctagcctgtttagccctagtagtgctctgttcccttcctctcgcattcgc
tatggcctgtcagacgtcatgccctctggccggagcaggcttttggaggacttccgcaat
aaccgctaccccaacttacaacttcgggagattgcaggacacatcatggaattttctcaa
gaccagcatgggtccagattcattcagctgaagctagagcgtgccacaccagccgaacgc
cagctcgtctttaatgaaattttgcaggctgcctaccagctaatggtcgatgtctttggg
aactatgttattcagaaattctttgaatttggtagccttgaacagaagttggcgttggca
gaaagaattcgtgggcatgttttatccctggctttgcagatgtatggctgtcgggtcatc
cagaaagctctcgagtttattcccccagaccagcagaatgagatggtacgggagttggat
ggccacgtcctgaaatgtgtgaaagaccagaatggtaatcatgtggttcagaagtgtatc
gaatgtgtgcagcctcagtctctacagtttatcattgatgcatttaagggacaggtgttt
gcactgtctacacatccttatggttgtcgagtcattcagaggatcctggagcactgtctt
ccggaacagacgcttcccattttagaggagcttcaccagcacacggagcagctcgtccag
gaccagtatggaaactatgtaatccaacacgtattggagcatggtcgtcctgaggacaaa
agcaaaatcgtagcagaaataagagggaatgtgcttgtgttaagtcagcacaaatttgca
agcaatgttgtagaaaaatgtgttactcatgcatctcgcacggagcgtgccatgctgatt
gatgaggtgtgcaccatgaatgatggccctcacagtgccttatacaccatgatgaaagat
caatacgccaactacgtggtccagaaaatgatcgatgtggccgaaccagcccagcggaag
attgtcatgcataagatccggcctcacattgcaactttacgcaagtacacctatggcaaa
cacattctggcaaagctggaaaaatactatatgaagaatggggtggacttggggccaatt
tgcggaccacccaatggcatcatttga
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