Monodelphis domestica (gray short-tailed opossum): 100030165
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Entry
100030165 CDS
T01031
Symbol
NPC1L1
Name
(RefSeq) NPC1 like intracellular cholesterol transporter 1
KO
K14461
Niemann-Pick C1-like protein 1
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo04975
Fat digestion and absorption
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09150 Organismal Systems
09154 Digestive system
04975 Fat digestion and absorption
100030165 (NPC1L1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mdo02000
]
100030165 (NPC1L1)
Transporters [BR:
mdo02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
100030165 (NPC1L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
NPC1_N
Sterol-sensing
MMPL
Motif
Other DBs
NCBI-GeneID:
100030165
NCBI-ProteinID:
XP_001379744
Ensembl:
ENSMODG00000016148
UniProt:
F7D6Z0
LinkDB
All DBs
Position
1:complement(502283691..502326075)
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AA seq
1343 aa
AA seq
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MLSLLGPSLSTEMVEPGLRGVLLLVVLLHLVHGESYTPIHEAGRCAFYDDCGKNPELSGS
LIPLANVSCLSNTPAFKLSGDHLELLNKICPELYQGPDSTYACCSIQQLLDLQGSLSISK
TLLTRCPACAENFAAFYCHNTCSPNQSVFINVTRIANISGTNSSKVLAYETFYTRDFAER
AYNSCNKVQIPATGGLAVGAMCGVYGAKLCNAQRWLNFQGDTGNGLAPLEVTFNLVDPGQ
VLGNGLEPLDVETWGCNETRGNGSNACSCQDCASSCPVIAQPAMQDSTFRLGRMHGGLAL
AILLSALFVSFFTFLVVRSCQKTKAKKPKQGVRCSDRFSYFAHVILGNLFQSWGTWVASR
PKIVLCLSTILVVALASGLVFLELTTNPVELWSAPNSQARKEKEFHDRYFGPFFRTNQVI
LTAPNRPSYTYNSLLLGPKNFSGILSEDLLLQLLELQEELRHMEVWSEEERRNISLRDVC
YAPLNPRNPSLEDCCINSFLQYFQSNRTNFLLTANQTLMGHTAQVDWRDHYLYCVNSPLT
FKDGTTLALSCMADYGAPVFPFLAVGGYTGQDFSAAEALLLTFSLNNYPAGDPRLAQTLL
WESRFLEVMRDFQKRTAGTFDVTFMAERSLEDEINRTTAEDLPVFAISYAIVFLYISLAL
GRYSSRSRLLVDSKITLGLGGVLIVLGSVLSSMGFFSYLGVPSSMVIIQVVPFLVLAVGA
DNIFIFVLEYQRLPRHSEESREVHIGRVLGTVAPSMLLCSLSEAICFFLGALTSMPAVRT
FALTAGLAIIFDFLLQMSAFVALLSLDSKRQEASRLDICCCVNPRKLPPPQEDESLLLCF
FRKFYAPFLLHGFTRIIVLGLFMALFGGSLYLMCHINVGLDQELALPEDSYLLDYFHFLN
RYFEVGVPTYFVTTSGFNFSSLDGMNSICSSSGCDTYSLTQKIQYATEFPKESYLAIPAS
SWVDDFIDWLTPTSDCCRLYRNNTFCSSTEGTVLTCFRKCIPYTTSTVRPTVEQFHKYLP
WFLEDKANIKCPKGGLGAYDGAVNISADGEILATRFMAYHTPLKNSQEYTAALRAARELA
ANITADLRRVPGTDPKFEVFPYTVTYVFYEQYLTIVPEGLFILGLCLIPTFAVSCLLLGM
DLRSGLLNLFSIIMILVDTVGFMTLWGISYNAVSLINLVTAVGISVEFVSHITRSFAIST
KPSRLERAKETTIIMGSAVFAGVAMTNLPGIIILAAAKAQLIQIFFFRLNLLITIFGMLH
GLVFLPVILSYFGPDVKQVLVLEQQPIEKNTMSGKAEVAKAASCSTHPSPLYPDLNSYTN
LNFEADVTQFPRDTKGLEPTTPL
NT seq
4032 nt
NT seq
+upstream
nt +downstream
nt
atgctctctttacttggtccctcactcagcacagagatggttgagcctgggttgagggga
gtgctgctcttggtggttctcctgcatttggtccatggagagagctacacgcctatccac
gaagccggcaggtgtgccttctacgatgactgtgggaaaaaccccgagttgtccggcagt
ctcatcccactggccaacgtgtcttgcttgtccaacactccagcctttaaactcagtggg
gaccacttggagcttctgaataagatctgcccagagctgtatcaaggaccagactctact
tatgcctgctgttccatccaacagctgctggatctgcagggcagcttgtcaataagcaaa
acccttcttacccgctgcccagcctgtgcggagaactttgctgccttttactgccataat
acctgtagccccaaccaaagtgtcttcatcaatgtcacccgtatcgctaacatttcaggg
accaactcctccaaggtgttggcctatgagactttctatacacgtgactttgccgagcgg
gcctacaactcctgcaacaaggtgcaaatccccgccactggcggcttggctgtgggtgcc
atgtgcggggtatatggagccaaactctgtaacgcccagcgttggctcaatttccagggc
gacacagggaatggattagctcccttggaagtcacctttaatcttgtggaccctggccag
gtcctagggaatgggctagagcccctggatgtagaaacatggggctgcaatgagactcgg
ggtaatggttccaatgcatgctcttgccaggactgtgcctcatcctgtcctgtgattgcc
caacctgccatgcaggattctactttccgcctggggagaatgcatggggggctggccctg
gccatcctcctctctgctctctttgtctcattcttcactttccttgtggttcgctcttgt
cagaaaacaaaggccaagaagcccaagcaaggtgtacgctgctctgatagatttagctac
tttgcccacgtcatcctgggcaaccttttccagagctggggcacgtgggtggcctcccgg
cccaagatagttttgtgtctctccacgatactggtagtggcactggcaagtggactggtc
ttcctggagctgaccaccaatccagtggagttatggtcggctcccaacagccaggccagg
aaggagaaggaattccatgaccgctattttgggcctttcttccgcaccaaccaggtgatc
ttgacggctcctaaccgacctagctatacctacaattccctccttctgggacccaagaac
ttcagcggcattctgagcgaggacttgctccttcagcttctggagctgcaagaggagctg
aggcacatggaggtctggtccgaggaagagcggcgcaacatctctctgagagacgtctgc
tatgcccctctcaacccccgcaatcccagcctggaggactgctgcatcaacagcttcctg
cagtatttccagagcaaccgcaccaacttcctactcactgccaaccagaccctgatgggg
cacaccgcccaggtggactggagagaccactatctctactgtgtcaattcccctctcaca
ttcaaggatggtacgaccttggctctgagctgcatggctgattatggggctccagtcttt
cccttccttgctgtgggaggttacacagggcaggatttttcggctgctgaggccctcctg
ctgactttctccctgaacaactaccctgctggggatccccgcttggctcaaactctgctc
tgggagagccgctttctggaggtgatgagagacttccagaagcgtacagcaggcaccttt
gacgtcactttcatggcagagagatctctggaagatgagataaaccgcaccacagctgag
gacctgccagtctttgccatcagctacgccattgtctttctgtacatttctctggccctg
ggtagatactccagccgatctcgcttactggtggactccaagataaccctgggcctaggc
ggggtcctaatagtgctgggatctgtcctctcttcaatgggcttcttctcctacctgggc
gtcccgtcttctatggtgatcatccaagtcgttcccttccttgtactggctgttggagct
gacaacatcttcatctttgttctcgagtaccagaggttgccacggcactcagaggaaagc
cgggaggtgcatattggacgagtcctgggcactgtagctcccagcatgcttctttgtagt
ctctctgaggccatctgtttcttcttaggtgcactgacctctatgccagctgtgcgaacc
tttgctctgacagccggcttggccataatctttgacttcctgctgcagatgtcggccttt
gttgctttgctctccctggacagcaagaggcaagaggcctcacgcttggatatatgctgc
tgtgttaaccccaggaaattgcctccccctcaggaggatgaaagtttactactttgcttc
ttccgaaagttttatgctcccttcttgcttcatggattcacccggattattgtgcttggg
ctattcatggccctgtttggtgggagcctgtatctcatgtgccacatcaatgtggggctg
gaccaggagttggcactacctgaggattcatatcttttggattacttccacttcctgaac
cgttattttgaagttggagtgcccacttactttgtgaccacttctggctttaacttttca
agtttggatggcatgaattctatctgttccagttctggatgtgatacatactccttgacc
caaaagattcaatatgccacagaatttcctaaagagtcttatctagctatcccggcttcc
tcctgggtagatgacttcattgactggctgacacccacttctgattgctgtcgtctttat
agaaataataccttttgttcttctacagaaggtactgttttgacctgctttcggaagtgc
ataccttataccacaagtactgtgcggcccacagtggagcagttccataagtacctgcct
tggtttttggaggacaaggccaatatcaaatgtcccaaagggggcctgggtgcttatgat
ggtgccgtgaacataagtgcagatggggaaatcttagccacccggtttatggcttaccat
acaccgctcaagaattctcaagagtacacagcagccctgagggctgcccgggaactggcg
gccaacatcacagctgaccttcggcgagttccagggactgatcccaagtttgaagtcttc
ccctacacggtcacatatgtgttctatgaacagtacctgaccatcgtcccagaggggtta
ttcattctgggtctctgcctcatacccacatttgctgtctcctgcctcctgcttgggatg
gacctccgctcaggcctcctcaatctcttctccatcatcatgatccttgtggataccgta
ggcttcatgaccctgtggggcattagctacaatgctgtgtccctcatcaatcttgtcacg
gctgtgggtatttcagtggagtttgtgtcccatatcaccagatcctttgccatcagtacc
aagccctctcggctggagagagccaaagagaccaccatcattatgggcagtgcggtattt
gctggagtggctatgaccaatctccctggcatcatcattctggctgctgctaaggcccaa
ctcatccagatcttcttctttcgcctcaacctcctcatcaccatctttggcatgctgcat
ggcctcgtctttctacctgtgatcctcagctattttgggccagatgtcaaacaagtcctg
gtcttggaacaacagccaatagaaaagaataccatgtcaggcaaggcagaagttgccaag
gcagcttcttgctcaacacatccttctccattgtatcctgacttgaattcctataccaat
ttgaattttgaggctgatgtgactcagtttcctagagacaccaaaggactcgagccaaca
acacctctttga
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