Monodelphis domestica (gray short-tailed opossum): 100030405
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Entry
100030405 CDS
T01031
Symbol
CAPN1
Name
(RefSeq) calpain 1
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo04141
Protein processing in endoplasmic reticulum
mdo04210
Apoptosis
mdo04217
Necroptosis
mdo04218
Cellular senescence
mdo04382
Cornified envelope formation
mdo05010
Alzheimer disease
mdo05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100030405 (CAPN1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
100030405 (CAPN1)
04217 Necroptosis
100030405 (CAPN1)
04218 Cellular senescence
100030405 (CAPN1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
100030405 (CAPN1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
100030405 (CAPN1)
05022 Pathways of neurodegeneration - multiple diseases
100030405 (CAPN1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mdo01002
]
100030405 (CAPN1)
Enzymes [BR:
mdo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
100030405 (CAPN1)
Peptidases and inhibitors [BR:
mdo01002
]
Cysteine peptidases
Family C2: calpain family
100030405 (CAPN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_7
EF-hand_8
Motif
Other DBs
NCBI-GeneID:
100030405
NCBI-ProteinID:
XP_007502794
Ensembl:
ENSMODG00000010045
LinkDB
All DBs
Position
8:complement(14114061..14135538)
Genome browser
AA seq
681 aa
AA seq
DB search
MTEEIITPVYCTGVSAQVKKQRAKDLGLGSHENSIKYLGQDYDQLRSQYLQAGVLFQDET
FPPSPHSLGFKELGPNSSKIYGVKWKRPTELLSNPQFIVDGATRTDICQGALGDCWLLAA
IASITLNEPILHRVVPHGQSFQDGYAGIFHFQLWQFGEWVDVVVDDLLPTKDGKLVFVHS
AQGNEFWSALLEKAYAKVNGSYEALSGGSTSEGFEDFTGGVTEWFNLRKPPQDLYQIILK
ALERGSLLGCSIDVSLLPLAPPSFQPHFCCPFYFIFQRSMYFPSQPPPIEKKNKTRATNG
HRTVPLSHAPSPPPPLCPGESPAFLREFWGPPSLSYPPVLLWVLLTPFWISSYKSRVSSL
FAAQSPSFLSGRAPSSPPKREAQKHFSALAPPLSRFIAFALPSFPQSVLTATFWVNPQFK
IKLEEVDDQPDGHFGGHDSGCSILLALMQKHRRRERRYGRDMETIGFAVYDVPRELVGKP
SVHLKREFFLSHSSRARSEEFINLREVSSRLCLPPGEYIVVPSTFEPNKEGDFVLRFFSE
KKAGTEELDDKIEAHLPDERVLSEEEIDDTFKNLFKQLAGADMEISVKELQTILNKIVGK
HKDLRTDGFSKESCRSMVNLMDRDGNGKLGLVEFNILWNRIKNYLTIFRKYDVDKSGSMS
SYEMRMALEAAGEALTWSGSY
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgacagaagagatcatcacccctgtgtactgcacaggggtgtctgcccaagtgaagaag
cagcgggccaaagatttgggcctgggcagccatgagaacagcattaagtacttgggccag
gactatgaccagctccggtcccagtacctgcaggctggggtcctgttccaggacgagacc
tttcccccttctccccattccctgggcttcaaggaactggggcccaactcctccaaaatc
tatggcgttaagtggaaaaggcccacggaacttctttcaaacccccagtttatcgtcgat
ggggccacccgaactgacatttgtcagggagcactgggagactgctggcttctggcagcc
atcgcatccatcaccctgaatgagcccatcttgcaccgggtggtaccccatgggcagagc
ttccaggatggctatgctggcatctttcatttccagctgtggcagttcggggagtgggtc
gacgtggtcgtggacgacctgctgcccaccaaggacgggaagctggtcttcgtgcactcg
gcccaaggcaacgagttctggagcgccctgctggagaaagcctacgccaaggtgaatggc
agctacgaagccctgtcggggggcagcacatcggagggcttcgaagacttcacgggaggc
gtcaccgagtggttcaatctcaggaagcctcctcaggatctctaccagattattctgaag
gccctggagcgggggtccctgctgggctgctccatcgacgtgagtcttctacccctggct
ccgccctcctttcagccccacttttgttgtcccttttactttattttccaaagaagcatg
tattttccctctcaacctccccccattgagaagaaaaacaaaacccgggccacaaatggc
cataggacagttcccctgtctcatgccccctcccctccccctcccctctgtccaggggag
agccctgccttcctcagggaattctgggggccgcccagcctgtcataccctcccgtccta
ctctgggttctgctcacgccattttggatcagttcatacaagtcccgggtttcttccttg
tttgcagcccaatccccctcctttctcagtgggcgggcaccctcctctcccccaaaaaga
gaagcccagaagcactttagtgccttggctcctcctctttcccggtttatagcttttgct
ttgccctcattcccccaatctgttcttacagccaccttctgggtgaacccccagtttaag
atcaaactggaggaggtggacgaccaacccgacggccactttgggggccacgattctggt
tgcagcatcctgctggcgctcatgcagaaacatcgacggcgagagcgccgctacggccgg
gatatggagaccattggcttcgcggtctatgatgttcctcgggagttggtgggcaagcct
agtgtgcacctgaagcgggaattcttcctgtctcactcatcccgggcccgctcggaggag
ttcatcaacctgagggaggtcagctcccgcctgtgcttgcctcctggagagtacattgtg
gtgccctccacctttgagcccaacaaggaaggcgactttgtactccgcttcttctccgag
aagaaggctgggactgaggagctggatgacaagatcgaggctcaccttcctgatgagaga
gtgctctcggaagaggagattgatgataccttcaagaacctttttaagcagttggccggg
gcggacatggagatcagtgtcaaggaactgcagaccatcctgaataagattgttggcaaa
cacaaagacctccggactgatggctttagcaaggagtcatgccgaagcatggtgaatctc
atggatcgggatggcaatggaaaactggggctggtggagtttaacatcctttggaaccga
atcaaaaattatctgaccatcttccggaagtatgacgtagacaagtcgggcagcatgagc
tcctatgagatgcggatggctcttgaagcagcaggtgaagccctgacctggtcggggagc
tactag
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integrated database retrieval system
