Myotis daubentonii (Daubenton's bat): 132217519
Help
Entry
132217519 CDS
T10294
Symbol
CNOT1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
mdt Myotis daubentonii (Daubenton's bat)
Pathway
mdt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mdt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132217519 (CNOT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdt03019
]
132217519 (CNOT1)
Messenger RNA biogenesis [BR:
mdt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
132217519 (CNOT1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
132217519 (CNOT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
132217519
NCBI-ProteinID:
XP_059523855
LinkDB
All DBs
Position
15:51999406..52072747
Genome browser
AA seq
2383 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECASLITKPNFISTLSYAIDNPLHYQKSLKPAPHLFAQLSKVLK
LSKVQEVIFGLALLNSSSSDLRGFAAQFIKQKLPDLLRSYIDADVSGNQEGGFQDIAIEV
LHLLLSHLLFGQKGAFGVGQEQIDAFLKTLRRDFPQERCPVVLAPLLYPEKRDILMDRIL
PDSGGVAKTMMESSLADFMQEVGYGFCASIEECRNIIMQFGVREVTAGQVARVLGMMART
HSGLTDGIPLQSISAPGSGIWSDGKDKSDGAQAHTWNVEVLIDVLKELNPGLNFKEVTYE
LDHPGFQIRDSKGLHNVVYGIQRGLGMDVFPVDLIYRPWKNAEGQLSFIQHSLINPEIFC
FADYPCHTVVIDILKAPPEDDNREIATWKSLDLVESLLRLAEVGQYEQVKQLFSFPIKHC
PDMLVMALLQINSSWHSLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
AMAEWYMRGEHYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSAQLPPETLATMLACLQACAG
SVSQELSETILTMVANCSNVMNKARQPPPGVMPKGRPPSASSLDAISPVQIDPLAGMASL
SIGGSAAPHTQSMQGFPPNLGSAFSTPQSPAKAFPPLSTPNQTTAFSGIGGLSSQLPVGG
LGTGSLTGIGTGALGLPAVNNDPFVQRKLGTSGLNQPTFQQSKMKPSDLSQVWPEANQHF
SKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSTIKREREVFNCMLRNLFEEYR
FFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFGSKMYYFGIAALDR
FKNRLKDYPQYCQHLASISHFMQFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSIALAQA
QAQAQVPTKAPLAGQVSTMVTTSTTTTVAKTVTVTRPTGVSFKKDVPPSINTTNIDTLLV
ATDQTERIVEPPENVQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVS
IEPNFHSLYSNFLDTLKNPEFNKMVLTETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLG
MITLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSIRSVVFRPPNPWTM
AIMNVLAELHQEHDLKLNLKFEIEVLCKNLALDINELKPGNLLKDKDRLKNLDEQLSAPK
KDVKQPEELPPITTTTTSTTPATSTTCTATVPPQPQYSYHDINVYSLAGLAPHITLNPTI
PLFQAHPQLKQCVRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSEESRMRIA
AHHMMRNLTAGMAMITCREPLLMSISTNLKNSFASALRTASPQQREMMDQAAAQLAQDNC
ELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPVVLTYQAERMPEQIRLK
VGGVDPKQLAVYEEFARNVPGFLPTNDLSQPTGFLAQPMKQAWATDDVAQIYDKCITELE
QHLHAIPPALAMNPQAQALRSLLEVVVLSRNSRDAIAALGLLQKAVEGLLDATSGADADL
LLRYRECHLLVLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVNMQ
QYDLHLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHITEADLFHTIETLMRINAHSRG
NAPEGLPQLMEVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPPGLREKAEYLLREWV
NLYHSAAAGRDSTKAFSAFVGQVELLERKMHQQGILKTDDLITRFFRLCTEMCVEISYRA
QAEQQHNPAANPTMIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGV
LLQDHDVRQSEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAPG
FVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELTKPMQILYK
GTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKVD
MLSEINIAPRILTNFTGVMPPQFKKDLDSYLKTRSPVTFLSDLRSNLQVSNEPGNRYNLQ
LINALVLYVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNAIANQ
LRYPNSHTHYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNP
AFKFWNHEFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7152 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggccttgtctcaaatcagctacctggtggacaattta
accaagaaaaactaccgagccagccagcaggaaatacagcatattgtgaatcggcacggt
cctgaggcagacaggcatttattacgctgcctattttctcatgtggatttcagtggcgat
ggtaaaagcagtggcaaagattttcatcagactcagtttctgattcaggagtgtgcttcg
ctgattacaaagccaaattttatctctacgttgtcctatgccattgataatccattgcac
tatcagaagagtttaaagcctgcaccccacttatttgcccagctaagtaaagttctcaag
ttaagcaaagtacaagaggtaatttttggccttgccctcttgaattcttccagctcagat
ctcagaggttttgctgcccagtttatcaaacagaagctcccagaccttctgcgttcttac
attgacgcagacgtcagtggaaatcaagaaggtggcttccaagatatagcaatagaggtg
ctacacctcctcctctcccatctcctctttgggcagaagggagccttcggagttggacag
gagcagatagacgcttttcttaagacactgcgcagagattttccccaggaacgctgtccc
gtggtgcttgcaccacttttataccctgaaaaacgggacattctaatggacaggatcctg
cctgattctggaggggtagctaaaaccatgatggagagctctctggctgatttcatgcaa
gaagtaggctatggcttttgtgcaagtattgaagaatgtcgcaatataatcatgcagttt
ggtgttcgggaggttacagctggccaggtagcaagggttttgggaatgatggctcgaact
cattcaggattaacagatggaattccattgcagagtatctctgctcctggcagtgggatc
tggagtgatggaaaagataaaagtgatggcgcacaggcacacacatggaatgtagaagtc
ttgattgatgttctcaaagagctgaacccgggtttgaatttcaaggaagtaacttatgaa
ctggatcatcctggatttcaaattcgtgacagtaaaggacttcataatgtggtttatggc
attcaaaggggtttgggtatggatgttttcccagtagacctcatatatagaccttggaaa
aacgcagaaggccagctctcctttattcagcattcccttataaatccagagatcttctgt
tttgctgactatccctgtcatactgttgtcattgatattctgaaagcaccaccagaggat
gacaatcgagaaattgccacttggaagagcttggatttggttgaatctctactgaggctc
gcagaggtgggacaatatgagcaagtcaaacagctctttagcttccctatcaaacactgt
ccagacatgctggtaatggccttactacaaatcaacagctcctggcacagcttgcgccat
gaactcatctctactctgatgccaattttccttggaaaccatcctaactcagctattatt
ttgcactatgcatggcatgggcagggacagtctccctctatccgccaacttatcatgcat
gcaatggcagaatggtacatgcgaggagagcattatgaccaggccaaattgtctcgaata
cttgatgtggcccaggacttgaaggccttgtcaatgctgctaaatggtactccatttgcc
tttgttattgaccttgctgcacttgcttcacgtcgtgaatacctcaaacttgacaagtgg
ctcacagataaaattcgagagcatggagagccttttatccaggcatgcatgactttttta
aagaggcggtgtccttctattttgggtggacttgccccagagaaagatcagcccaaaagt
gctcaacttcctccggaaactctggcaacaatgttggcctgtttacaagcttgtgcaggg
agtgtttctcaggaattatcagaaaccatcctcaccatggtagccaattgcagcaatgtc
atgaataaggccagacaaccgccacctggagttatgccaaaaggacgccctcccagtgct
agcagcttagatgccatttctcctgttcagattgaccctcttgctggaatggcatctctt
agtataggtggttcagctgcccctcacacccagagtatgcagggttttcctccaaatttg
ggttctgcattcagtaccccccagtcaccagcaaaagcatttccacccctttctactcca
aatcaaacaactgcattcagtggtatcggaggactttcatcacagcttccagtaggtggt
cttggcacaggcagcctgactggtataggaactggggcgcttggactccctgcagtgaat
aacgatccttttgtacagaggaaactgggcacctctggactgaaccagcctacattccag
cagagtaagatgaaaccttcggacttgtctcaggtgtggccagaggcaaatcagcacttt
agtaaagagatagatgatgaagcaaacagctatttccagagaatatataatcacccacca
catccaaccatgtctgttgatgaggtattagaaatgctacagaggtttaaagactctacc
ataaagagggaacgagaagtatttaattgtatgctaaggaacttgtttgaagaatatcgt
tttttcccccagtaccctgataaagagttacatataacagcctgcctgtttggtgggata
attgaaaaaggactggtcacttatatggcactaggcctggccctgcgatatgttcttgaa
gccttacgcaagccttttggatccaaaatgtattattttggaattgctgcactagataga
tttaaaaatagattgaaggactatccccagtattgtcagcacttggcttctatcagtcac
tttatgcaatttccacatcatttacaggagtatatcgagtatggacagcaatcgagagat
cctcctgtgaaaatgcagggctctatcacaacccctggaagtattgcactggctcaggcc
caggctcaggcccaggttcccacaaaagcacctcttgctgggcaggttagcactatggta
accacctcaacaaccactactgttgcaaaaacggttacagtcaccaggcctactggagtc
agctttaagaaagatgtgccaccttctattaatactacaaatatagatacattgcttgtg
gccacagatcaaactgaaagaattgtagagccccccgaaaatgtccaagagaaaattgct
tttatcttcaacaatctctcacagtcgaatatgacacaaaaggttgaagaactaaaggaa
acagtgaaggaagaattcatgccttgggtttcacaatacctggttatgaagagagtcagt
attgagccaaactttcacagcctgtattcaaacttccttgacacactgaagaatcctgaa
tttaataagatggttctaactgagacctacagaaacatcaaagtgctcttgacctctgat
aaagctgcagccaatttttcagatcgctctttgctgaagaacttgggacactggctagga
atgatcacactagctaaaaataaacccatcttacatactgacttggatgtcaagtctttg
ctgctagaagcttatgttaaaggacagcaagaattgctctatgtggtgcccttcgttgcc
aaagttttagagtctagcattcgtagcgtggtttttaggccacccaacccctggacaatg
gcaattatgaatgtattagctgagctacatcaggaacacgacttaaagttaaacttgaag
tttgagattgaggtcctctgcaagaaccttgcattagacatcaacgagctaaaacctgga
aacctcctaaaggataaagatcgtctaaagaacttagatgagcagctctctgctccaaag
aaagatgtcaagcagccagaagaacttcctcccatcacaaccacaacaacttctacaaca
ccagctactagtaccacctgcacagccactgttccaccacagccacagtacagctatcat
gacatcaatgtctattcccttgcgggcctggcaccacatattactctaaacccaacaatt
cccttgtttcaggcccatccacagttgaagcagtgtgtgcgccaagcaattgaacgggct
gttcaggagttggtccatcctgtggtggatcgatcaattaagattgccatgactacttgt
gaacaaatagtcaggaaggattttgccctggattctgaggaatctcgaatgcgaatagca
gctcatcacatgatgcgtaacttgacagctggaatggctatgattacctgcagggaacct
ttgctcatgagcatatccaccaacctgaaaaacagttttgcctcagcccttcggactgca
tccccacaacaaagggaaatgatggatcaggcagctgctcagttagctcaggacaattgt
gaattagcttgctgttttattcagaagactgcagtggaaaaagcaggccctgagatggac
aagagattagcaactgaatttgagctgagaaaacatgctaggcaagaagggcgcaggtac
tgtgatcctgttgtgttaacataccaagccgagcggatgccagagcaaataagactgaaa
gttggtggtgtggacccaaagcagttggctgtttatgaagaatttgcacgcaatgtgcct
ggtttcttgcctacgaatgatttaagtcagcccacaggatttttagctcaacccatgaag
caagcttgggcaacggatgatgtagctcaaatttatgacaagtgcattacagaactagag
cagcacctacatgccatcccaccagctttggccatgaaccctcaagctcaagctcttaga
agtcttttggaggttgtagtattatctcgaaactctcgggatgccatagctgctcttgga
ttgctccagaaggctgtagagggcttactagatgccacaagtggtgctgatgctgacttg
ctgctgcgctacagggaatgccacctcttggtcttgaaggctcttcaagatggccgggcg
tatgggtcgccgtggtgtaacaaacaaatcacaaggtgcctaattgaatgtcgggatgaa
tataaatataatgtggaggcagtggagctgctaattcgcaatcatttggttaatatgcag
cagtatgatcttcacctagctcagtccatggagaatggtttaaactacatggctgttgca
tttgctatgcaattggtaaaaatcctgctggtggatgaaaggagtgttgcccatattact
gaggctgatctgttccacaccattgaaaccctcatgagaattaatgctcactccagaggc
aatgctccagaaggattgccccagctgatggaagtagtgcgatccaactatgaagcaatg
attgatcgtgctcatggaggccctaactttatgatgcattctgggatctctcaagcctca
gagtacgatgatcctccaggcctgagggagaaggcagagtatcttctgagggaatgggtg
aatctctaccattcagcagcagctggccgtgacagtaccaaagctttctctgcgtttgtt
ggacaggtagagcttttggaaagaaagatgcatcagcaaggaatcctgaagactgatgac
ctcataacaaggttcttccgtctctgcactgaaatgtgtgttgaaatcagttaccgtgcc
caggcagagcagcagcacaaccctgctgctaatcccaccatgatccgagccaagtgctat
cacaacctggatgcctttgtccgactcattgccctgttagtgaagcactcaggggaggcc
accaacactgtcacaaagattaacctgctgaacaaggtccttggtatagtagtgggagtt
ctcctacaggatcatgatgtccggcaaagtgaatttcagcagcttccctaccatcgcatt
tttatcatgctgctcttggaactcaatgcacctgaacatgtattggaaaccattaatttc
cagacacttacagctttctgcaatacattccacatcttgaggcctaccaaagctcccggc
tttgtgtatgcgtggcttgaattgatctcccatcggatatttattgcaagaatgctggca
catacgccacagcagaagggatggcctatgtatgcacagctactgattgatttattcaaa
tatttagcacctttccttagaaatgtggaactcaccaaacctatgcaaatcctctacaag
ggcactttaagagtgctgctggttcttctgcatgatttcccggagttcctttgtgattac
cattatggattctgtgatgtgatcccacccaattgtattcagctaagaaacctgatcctg
agtgccttcccaagaaacatgaggctcccagacccattcactcctaatctgaaggtagat
atgttgagtgaaattaacatcgcgccccggattctcaccaattttactggagtgatgcca
cctcagttcaaaaaggatttggactcctatcttaaaactcggtcaccagtcacttttcta
tctgatctgcgcagcaacctacaggtatcaaatgagcctggcaatcgctataacctacag
ctcatcaatgcactggtgctctatgtcgggactcaggccattgcacacatccacaacaag
ggcagcacaccctcaatgagcaccatcacccactcggctcacatggacatattccagaac
ctggctgtagacttggacactgaaggtcggtatctcttcttaaatgcaattgcaaaccag
ctgcggtacccaaatagccacactcactacttcagctgcaccatgctatacctttttgca
gaggccaacactgaagctatccaagaacagatcacaagggttctcttggaacggttgatt
gtaaataggccacatccttggggtctacttattaccttcattgagctgattaaaaatcca
gcatttaagttctggaaccatgaatttgtacactgtgccccagaaattgaaaagttattc
cagtctgtcgcacagtgctgcatgggacagaagcaggctcagcaagtaatggaagggaca
ggtgccagttag
DBGET
integrated database retrieval system
