Myotis daubentonii (Daubenton's bat): 132233409
Help
Entry
132233409 CDS
T10294
Symbol
SKIC3
Name
(RefSeq) superkiller complex protein 3
KO
K12600
superkiller protein 3
Organism
mdt Myotis daubentonii (Daubenton's bat)
Pathway
mdt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mdt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132233409 (SKIC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdt03019
]
132233409 (SKIC3)
Messenger RNA biogenesis [BR:
mdt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
132233409 (SKIC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_19
TPR_17
TPR_8
TPR_14
TPR_16
TPR_CcmH_CycH
TPR_11
TPR_12
TPR_9
ANAPC3
ARM_TT21_2nd
Sel1
ARM_TT21_5th
Fis1_TPR_C
ARM_TT21_C
TPR_15
TPR_20
ANAPC5
TPR_30
Retrotran_gag_2
TPR_5
BTAD
PknG_TPR
Motif
Other DBs
NCBI-GeneID:
132233409
NCBI-ProteinID:
XP_059550047
LinkDB
All DBs
Position
4:62137713..62212255
Genome browser
AA seq
1564 aa
AA seq
DB search
MSSKEVKTALKSARDAIRNKEYKEALKHCKTVLKQEKNNYNAWVFIGVAAAELEQPDQAQ
GAYKKAAELEPDQLLAWQGLASLYEKCNQINAKDDLPGVYQKLLDLYESVDKQKWCDVCK
KLVDLNYQEKKHIEVARTWHKLIKIRQEAGADNQELHQLWRKLTHLLAESTEDQNNETQQ
LLLTAFENALDLSDKIPSEDHQVLYRHFIQCLSKFPHETARLKKACEGMISIYPTVQYPL
EVLCLHLIESGSLTEEGQQYCCKLVEMDSKSGPGLIGLGIKALQDKKYEDADRNLREGLK
ESPLCTTGWYHLAEAQVKMHRPMEAVLSCNQALKNIDNVGVSGGSLHQKNLCLRLKAEAL
IKLPDNESAEEAICTLDQVSDANNIPGLLVLKSLAYLNKGSLDEASKIMEDVLSSYPDLA
EAHALEAFIHFTKKDYLQAEKCFQRALEKDAEVAEYHYQLGLTYWFMGEETRKDKTKALT
HFLKAARLDTYMGKAFCYLGHYYRDVAGDKNRARGCYRKAFELDDTDAESGAAAVDLSVE
LEEMETALAILTTVTQKASAGTAKWAWLRRGLYYLKAGQHSQAVADLQAALRADPKDFNC
WESLGEAYLSRGGYTTALKSFTKASELNPESTYSVFKVAAIQQILGKYKEAVAQYQLIIK
TKEDYVPALKGLGECHLMMAKAALVDYLDGKAVDYIEKALEYFTWALQHRDDVSCLWKLV
GDACTSLHAVSPSKVNVNVLGVLLGQKEGKQVLKKNELLHLGGRCYGRALKLMSTSSTWC
DLGINYYRQAQHLAETGSNMNDLKDLLEKSLHCLKKAVRLNSNSHLYWNALGVVSCYSAI
KNYALAQHCFIKSIQSEQINPVAWTNLGVLYLANENIEQAHEAFKTAQSLDPSYLMCWIG
QALIAETVGSYDTMDLFRHTTELSMHTEGAIGYAYWVCTTLQDKSNRETELYRYNILQMN
AIPAAQVVLSKYIERIPNYAPALTMLSYLNEHLQLKKEAADALHRAILLLQNAEDQVNYH
DAIRNYGRLLCSIGEYDKAIQSFKSTPLEELEDIIGFALALFMKGLYKESSKAYERALSV
VESEQDKAHILTALAITEYKQGKMDVAKTLLFKCSVLKEPTIESLQALCALGLAMQDATL
SKAALNELLKHVKQKDNDYQRCLLTSAIYALQGRSVAVQRQASKAVHSNPADPALWSLLS
RVVAQYAQHNAKGGAVAGNVAHILDSNHGKKALLYTAVNQLAMGSSSAEDEKNIALKTIQ
KATLLSPGDPAIWAGLMAACYADDKLALVNNTQPKRMDLYLALLSAVSASIKDKEFFESY
KESLEKWSLSQAVTGLVDTGRISEAEALCTKNLKSNPDQPAVILLLRQVQCKPLLESQKP
LPDAVLEELQKTVMSNSTSVPAWQWLAHIYQSQGMMSAAEMCYRKSLQVASQQGSWNGKL
SSLLRLALLALEVCMANISNDHWPSLVQEATTEALKLCFCPLAILLQALIQFNRKMGARE
TRRLLERLVYQPGYPKSIVSTARWYLLRHLHAKNDGELIDVLVNNAKTHGDTRVLDLNQK
LSSQ
NT seq
4695 nt
NT seq
+upstream
nt +downstream
nt
atgtctagcaaggaagtgaagactgctctgaaaagtgctagagatgcaatcagaaacaaa
gaatacaaagaagctttgaaacattgtaagacagtgttaaaacaagagaaaaataactat
aacgcctgggtatttatcggtgtggccgcagccgagctagaacaacctgatcaggcccag
ggtgcctataagaaagcagctgaactagagccagaccaattactagcttggcaggggtta
gcaagcctgtatgagaaatgtaatcagataaatgctaaggatgacttacctggtgtttac
caaaagctcctggatctttatgaaagtgttgacaaacagaagtggtgtgatgtctgtaag
aaacttgtggatctgaattatcaagaaaagaaacacatagaggtggctcgaacatggcac
aaattgataaagataaggcaagaagcaggtgcagacaaccaagagcttcatcagctgtgg
aggaaattgactcatttgctggctgagagtactgaggatcagaataatgagacacagcaa
ttgcttttaactgcttttgagaatgcactggatttatcagataagattcctagtgaagat
catcaagtactttatagacatttcattcagtgtttatccaaatttcctcatgagactgct
aggttgaagaaggcctgcgaaggaatgataagcatctaccccactgtgcaatatccatta
gaagtgctttgtttgcatttaattgaatcaggaagtcttactgaagagggacaacagtat
tgttgtaaactagtggaaatggattcaaaaagtggtccaggcctcattggtttaggcatt
aaagcattacaagacaaaaagtatgaagatgctgataggaacttaagagaagggttaaaa
gaaagccctctctgcacaactggatggtatcatctggcagaagcccaagtcaaaatgcat
agaccaatggaagctgttctttcatgcaatcaagctctgaagaacatagataatgttggt
gtgtctggtggcagtcttcatcagaagaatctttgtcttcgtttgaaagcagaggctttg
attaaactcccagataatgaatctgcagaggaagcaatttgtactcttgaccaggtttct
gatgcaaataatatcccaggacttttggttctcaaaagcttggcctatctgaacaaaggc
tcattagatgaagcttcaaagattatggaagacgtcctctcttcttaccctgacctagct
gaagctcatgccctggaggcctttattcattttaccaaaaaggactatctacaagctgaa
aaatgttttcagagagctcttgagaaagatgctgaagttgctgaatatcattaccaactt
gggttaacgtattggttcatgggtgaagaaacaagaaaagataaaacaaaggctcttacc
cactttttaaaggctgccagactggatacatacatgggcaaagccttctgctatttaggt
cattattacagagatgtagcaggagataaaaacagagcccgtggatgttataggaaagct
ttcgaattggatgacactgatgctgaatctggagctgcagctgttgatttaagcgtggag
cttgaagagatggaaactgccttagctatcctaacaacagtaactcagaaggcaagtgct
ggaactgccaaatgggcctggcttaggcgaggactgtactatttgaaagctggtcaacat
tctcaagcagtggctgatttacaggcagcattaagggcagacccaaaggacttcaattgt
tgggaatcattaggagaggcatacttaagcagaggtggttatacaacagccttgaaatcc
ttcacaaaggccagtgagctgaacccagaatccacatacagtgtgtttaaggtggcagca
atacagcaaatcctaggcaaatataaggaggctgtagctcaataccagctgatcattaaa
acgaaagaagattatgtacctgctttgaaaggtttgggtgagtgccatctcatgatggca
aaagcggctcttgtcgattatcttgatgggaaagctgttgactacatagaaaaagcactg
gaatattttacttgggctctgcagcatcgagatgatgtgtcttgcctttggaagctagtt
ggggatgcttgtaccagtctgcatgctgtttcgccatctaaagtgaatgttaatgtttta
ggagtccttctaggccagaaagaaggaaaacaagtattaaagaaaaatgagctcctccat
ctaggaggaaggtgttacgggcgtgctttaaaactgatgtctacatctagtacatggtgt
gatcttggaattaattattatcgtcaagcacaacacctagcagaaactggcagcaacatg
aatgatcttaaagacttgttggagaaatcattacattgtctgaaaaaggcagtgagactc
aacagtaatagtcacttatactggaatgctcttggtgtggtttcatgttatagtgctatt
aaaaattatgccctggctcagcattgtttcatcaaatcaatccagtcagagcaaattaat
cctgttgcatggaccaacttgggagtgttataccttgcaaatgaaaacattgagcaagct
catgaagctttcaaaactgctcagtcccttgatccatcttatttaatgtgctggattgga
caagcccttattgcagagacagttggaagttacgacaccatggatctcttcaggcacacc
acagaactcagtatgcacactgagggagcgatcggttatgcatactgggtctgtactaca
ttgcaagataaaagcaacagagaaacagagctgtaccggtacaacatcctccagatgaat
gctatcccagcagcacaagttgttttgagtaaatacatagaaagaattccaaactatgct
ccagctctcacaatgttgagttatttaaatgaacatctacagctgaaaaaggaagcagca
gatgcactccacagggcaattttgttgttacagaatgcagaagaccaagttaattatcat
gatgcaattagaaattatggcagattgttatgttccattggtgaatatgataaagctatc
cagtcttttaagtcaacaccccttgaagagttagaagacatcatagggtttgcactggct
ttatttatgaagggtctctataaagagagcagcaaagcctatgagagagccttgtctgtt
gttgaatcagagcaagacaaagcccacatcttgacagctctggcaataacggagtataaa
caaggaaaaatggatgtagccaagacattgctgtttaaatgctctgtcttaaaggagcca
acaatagagagccttcaagccctgtgtgccttgggattggcaatgcaggatgctacactg
tcaaaagcagcacttaatgagttattgaagcacgtcaaacagaaagacaatgattatcag
aggtgccttctcacttcagcgatttatgcgctgcaaggccgcagtgtggcagtgcagaga
caagcatctaaagctgttcacagtaacccagctgatcctgctctttggtctctgttgtcc
cgagtggttgctcagtatgcacaacataatgcaaagggaggtgctgtagcaggaaatgtg
gctcatattctggactcaaatcatggaaagaaggcattactgtacactgcagtaaatcag
ttggctatgggaagcagttcagcagaagatgaaaaaaatattgcactaaagaccattcag
aaggcaactctcctttctccaggtgatcctgctatctgggctgggctaatggcagcttgt
tatgctgatgataaactggctctggtgaacaacactcagccaaaaaggatggatttgtat
ttggcactgttatctgctgtttctgcttcaattaaagacaaagaattcttcgaaagttac
aaagaatctctggaaaagtggtctctctcccaagctgtcacaggcctagtagacacagga
agaatatcagaagctgaagccctttgcacaaagaatttaaaaagcaaccctgatcagcca
gctgttatcttacttttgagacaagtgcagtgtaaaccactcctggaatcacaaaagcct
ctccctgatgctgtccttgaagagctgcaaaaaactgttatgtccaactcaacctctgtt
ccagcatggcagtggttggcgcacatatatcagtctcaaggaatgatgagtgctgcagag
atgtgttataggaagagtctacaagtcgcatcccagcagggcagttggaatgggaagctg
tcgagtctgttgaggctagcactgcttgcattagaagtctgcatggccaacatttcaaat
gatcactggccatccttggttcaggaagctacaactgaggccttgaagctttgcttttgt
ccactggctatccttttacaagctttgatacagttcaaccgcaaaatgggggcaagagag
acacggcgacttttggagagactggtgtatcagcctggctatcccaaatctattgtatca
actgcacgttggtacctactgaggcacttacatgccaaaaatgatggcgagctcattgat
gtgctggtaaacaatgccaaaactcatggagatacaagagtactggacctgaatcaaaaa
ctgtcctcacaataa
DBGET
integrated database retrieval system
