Mercurialis annua (annual mercury): 126688113
Help
Entry
126688113 CDS
T10153
Name
(RefSeq) uncharacterized protein LOC126688113 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
mean Mercurialis annua (annual mercury)
Pathway
mean03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mean00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126688113
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mean03019
]
126688113
Messenger RNA biogenesis [BR:
mean03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
126688113
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
126688113
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
CNOT1_TTP_bind
ARM_Cnot1
DUF3819
CNOT1_HEAT
NOT1_connector
EloA-BP1
Motif
Other DBs
NCBI-GeneID:
126688113
NCBI-ProteinID:
XP_050238652
LinkDB
All DBs
Position
LG6:complement(46401357..46420677)
Genome browser
AA seq
2416 aa
AA seq
DB search
MRTLSSTIPNHVRFLLRDLTEDNADSVFRELCQFIEYGVEESSMVLQSCLEIVLSQTTEL
KNMQLESVVLSIFKFLLERPNFSMVLRQSLISSEINEEFLENFCNLLHLSLTEKIAIGFA
LSDSEKIEIRTTAKKFCIAQIEELCSNPVSLNSADQIQSIVMFLQQSEGLSKHVDPFLQM
LSLVQPKDVFPFFLTPLLSDELRDNNFLRSMDLFHESEENEFDTLLAEMEKEMSAGDIVK
ELGYGCTFDASHCKEILTNFSPMTESTISKIVGIIARNHAGLEENQSTFSNFGLALGCSI
SSELPLLSSWNIDILVKTIKQLAPATNWIKVMENMDYEGFYIPNEEAFSFLMSVYRHACK
DLFPLHVLCGSIWKNAQGQLSLLKYAVLAPPEVFTFVHSGRQMVYNDAVHGHKLQVGHAN
HAWLCLDLLEVLCQLAERGHSSSVQSMLEYPLKHCPEVLLLGMAHINTAYQLIQYEVSFT
VFPMVMKNASGSGMILYLWHVNPTLVVRGFVDAFYIEPACIIKILDICQELKILSSVLEV
IPFAVGIRLAALASRNDFLDLEKWLTTNSVTYKDFFFEECIKFLKDVQLVGSQELSSSKP
FYHESSVMNIYTETSTTFLKVLKAHTGIIISTHLSEEMEKLHVTMDNPRLQNGGSADPST
PEPFSDDIEAEANSYFHQMFSGQLTIDAMVQMLARFKESLVQREQSIFECMIGNLFEEYR
FFPKYPERQLKIAALLFGSVIKHQLVTHLTLGIALRGVLDALRKPPDSKMFVFGINALDQ
FLDRLIEWPQYCNHILQISHLRSTHSNIVAFIDLALSRISSGHLESDVDNASTVYQRGLS
QSSFGNGELNGVSSAQPLHQLSSTLNVQQRHESPLDDRHKISVASSNDAKPILSPGGQSS
VALLSDNSIIPKFQLQSAVSAPSMLSSSHSFVRSSRGVTSTRFGSALNIETLEAAAERRE
TPIETPTQEIEGKIAFIINNISSANIEAKTKEFTEILKEQYNPWFAQYLVMKRASIEPNF
HDLYLKFLDKVNSKALNKEIVQATYVNCKVLLGSDLIKSSSEERSLLKNLGSWLGKLTIG
RNHVLLSREIDPKSLIIEAYEKGLMIAVIPFTSKILEPCQSSLAYRPPNPWTMAILGLLA
EIYSMPNLKMNLKFDIEVLFKNLGVDVKDITPTSLLKDRKREMEGNPDFSNKDVGPSQGH
LEAKTGIISSLNQVDLPLEVVNPTNSAAPTQLITPYAAPVHLPGGTLAEDDKLVTNVSDQ
LPSAQGLFQVPPPQPPFSVSQLTSALPNFASLVIINPKLNSLGLQLHFHRVVPLVMERAV
KDIVNSIVQRSVSIATQTTKELVLKDYAMETDETRIYHAAHLMVASLSGSLAHVTCKEPL
RNLISNQLRNSLQGLNIGSELLEHAVILATNDNLDLGCAAIEHAAAERAVIAIDSEIEQQ
LSARRKHRDGVGAAFFDANIYSQSSMSLVPEALRPKPGHLSVSQQRVYEDFLRLPLQSQS
SQSSHTLLASSSTSAGSTAMAGTYSSGSGIVNIGQSSAPGNVGFEAVSRAIDITTDPIES
NSAAFFSSPIHSGVDGANQQSSENESVSVPFSSAAPVPELHSGDASDGLKETGISLQPIS
SSTASDRLVSGSSDPSLSTRDALDKYQIVAQKLEALVMSDGKEAEIQGLITEVPEIILRC
VSRDEAALAVAQKVFKGLYENASNNFHVSACLAILATIRDVCKLVVKELTSWVIYSDEER
KFNKDITVGLIRSELLNLAEYNVHIAKLIDGGRNSKGATEFAVSLIQALVVEDSKVISEL
HSLVDALAKLAAKPGSAESLQQLIEIVRNPVTNSAVLSGFTVGKEEKVRQSRDKKSSNQL
TSNREEHVIVDSAEPDPAGFREQVSMLFADWYRICELPGANDAASNHYILQLHQNGLLKG
DDMTERFFRILTELSVSHCLSSEVINSGALQSSQQGQTLSFLAIDIFAKLVFSILKVEQG
SSRFFLLSKILGVTVRLIQKDSEEKKISFNPRPYFRLFVNWLLDLVSSDPVIDGANFQIL
TAFASAFHNLQPLKVPPFSFAWLELVSHRSFMPKLLTGNAQKGWPFVQRLLVDLFQFLEP
FLRSAELGMPVHFLYKGTLRVLLVLLHDFPEFLCDYHFTFCDVIPPSCIQMRNIILSAFP
RNMRLPDPSTPNLKIDLLPEIREAPHILSEVDAALKAKQMKADVDEYLKTRQQGSSFLTE
LKQRLLLSPSEAASAGTRYNVPLINSLVLYAGMQAIQQLQARAPHSQSTGNTAPLAVLLV
DAALDIYQTLVLELDTEGRYLFLNAVANQLRYPNNHTHYFSFVLLYLFAESNQEIIQEQI
TRVLLERLIVNRPHPWGLLITFIELIKNPRYNFWNRSFIRCAPEIEKLFESVARSCGGLK
PMDESMVSNWASEGTR
NT seq
7251 nt
NT seq
+upstream
nt +downstream
nt
atgcggacgttatcatcaacaattccgaatcacgtacggttcttgctccgcgacttgacc
gaagacaacgccgattctgtttttcgagagctttgtcagtttattgaatatggtgttgag
gaaagcagtatggtgcttcaatcttgcttggaaattgtgctttcccaaacaacagaattg
aaaaacatgcagctggaatcagttgttttgtctattttcaaatttcttttggagagaccg
aactttagcatggtgcttcgccagtcgcttataagttcagagatcaatgaagagttccta
gagaatttttgtaacttgttgcatttatctcttactgaaaaaattgctattggctttgct
ctttctgattctgagaaaatagaaatcagaacaactgcaaagaaattttgcattgctcag
attgaagagctgtgttccaatccagtttctttgaattctgcggaccaaattcagagtatt
gttatgttcctccagcagtctgagggcctctccaaacatgtagatccgtttttgcagatg
ttatccttggttcaacctaaagatgttttccctttctttctaactccattgctctcagat
gaattgcgggacaataatttcttgaggagcatggatctgttccatgaatccgaggaaaat
gaatttgatactctcttagctgaaatggagaaggagatgagcgctggtgatattgtgaag
gagttgggctatggatgcacatttgatgcctcacactgcaaagagatactgaccaatttc
tcacctatgactgagagtactatctcaaagatagttgggattattgcccggaatcatgct
ggccttgaggagaaccaaagcacattttcaaactttggcttagctcttggttgcagcatt
tcttctgaactcccactgttaagctcttggaatattgacatccttgtaaaaacaatcaag
caacttgctcctgctaccaactggataaaagtgatggaaaatatggattatgaggggttt
tacattccaaatgaagaagcattctctttcttgatgtctgtatatcgacatgcttgtaag
gatctcttccctctccacgtcctatgtgggtctatatggaaaaatgctcagggtcaacta
tctcttcttaaatatgctgtattggcaccaccagaagtgtttacttttgttcattctgga
aggcagatggtttacaatgatgcagtacatggacataagcttcaagttggacatgcaaat
catgcgtggctgtgtcttgaccttttggaagtgctctgtcaacttgctgagaggggtcat
tctagttctgttcaatcaatgcttgaatatcctctgaagcactgtccagaagtcttacta
cttgggatggcacatattaacactgcttatcaacttattcagtacgaagtgtctttcaca
gttttccccatggtaatgaaaaatgcctcaggtagtggtatgatactttacctctggcat
gtaaatcctactcttgttgtacggggatttgtggatgctttctacattgagccagcctgc
attatcaagatactcgacatctgccaagagctaaagattctgtcatcagtgttagaggtg
attccttttgctgttggtattagattggcagctctagcttcacggaatgattttttagac
cttgaaaagtggctgactactaactcagtaacatacaaggattttttctttgaggaatgt
ataaagtttttgaaggacgtccaacttgttgggtcgcaggaactctcttctagcaaacct
ttctatcatgagagttctgttatgaatatttatacggagactagcactaccttcctgaag
gtccttaaagctcacactggcataatcatctctactcatctttctgaggaaatggaaaaa
ttacatgttactatggataatccaaggctgcaaaatggtggctctgcagatccatctacc
cctgaaccgttctctgatgatattgaggctgaagcaaattcttatttccatcaaatgttt
tctggtcagttaacaattgatgctatggttcaaatgcttgctcgattcaaggaatcactt
gtacaaagggagcagtctatttttgagtgcatgattggcaatctatttgaggagtacagg
ttcttccctaagtatcctgaaagacaattaaaaattgctgctcttttatttggttctgtt
atcaagcaccagcttgtaactcatctaactcttgggatagcattacgtggtgttttggat
gcactacgcaaaccaccagattccaaaatgtttgtctttgggatcaatgccttggatcag
tttttagatcgcctgatagagtggccacaatattgcaatcatatcttacagatatctcat
ttgcgttcaactcattcaaatattgttgctttcatagatttggcactttccaggatctca
tctggtcatttggaatctgatgtagacaatgcttctactgtttatcaacgtggattatct
cagtctagctttggaaatggggagttgaatggtgttagcagtgcgcagcctctgcatcaa
ctttcctctacactcaatgttcaacagagacatgaaagtcctcttgatgaccggcataaa
atttctgtggcttcatcgaacgatgccaaacctattttatcacctgggggtcaatcttca
gttgctcttttaagtgataattcaatcataccgaagtttcaactgcagagtgctgtcagt
gctccatctatgctgtcttcttcacatagttttgtccgttcctcccgaggagtgacctca
accagatttggctcagctttgaacattgaaactcttgaagctgctgccgagaggagagaa
acaccgattgagacaccgacacaagagattgagggcaaaatagcattcataatcaacaat
atctcatctgcaaatattgaagctaaaacaaaagagttcactgaaatattgaaagagcag
tataatccctggtttgcccagtatctggttatgaaaagggcaagcattgagcctaatttt
catgatttgtacttgaaattccttgataaagttaactcaaaggccttgaataaagagatt
gtccaggccacttatgtgaactgcaaggttctcttaggttcagacctgataaaatcaagt
tcagaagaacggtcattgctaaaaaatttgggaagctggctcgggaaattaacaattggc
aggaatcatgttttgctgtctcgtgagatagatcccaaatctttgatcatagaggcttat
gagaagggtttgatgattgctgtaattccatttacttccaagattctggagccatgccaa
agcagtctagcctaccggcctcctaatccttggactatggcaattcttggattgcttgcc
gagatttattctatgccgaacttgaaaatgaatcttaagtttgatatagaggtcctattc
aagaatcttggtgtggatgtgaaggacataacacccacgtctcttttgaaggatcggaag
agagagatggaagggaatcctgatttctctaataaagatgtcggaccgtctcaagggcac
ttggaagctaaaaccggaataatctcttcccttaatcaggttgatttaccacttgaagtt
gtcaacccgactaattctgctgccccgactcaattgataactccgtatgctgctcctgtt
catcttcctggtgggacattagcagaggatgacaaattagttacaaatgtgtctgatcag
cttccttctgctcaagggctattccaagttcctccccctcagccgcctttctctgtcagt
cagcttaccagtgcactaccgaactttgcttcccttgttattatcaacccgaagctcaac
tctttggggttgcaactgcattttcatagagtggttcctcttgtaatggaaagagctgtc
aaagatatagttaatagcattgttcagcgtagtgtttctatagctacccagacgacaaag
gaacttgttttaaaggattatgcaatggaaactgatgagacgcgaatatatcacgcggca
cacttgatggttgcaagtttgtccggaagcctagcccatgtaacatgcaaggaaccattg
cgtaatttgatatcaaatcagctaaggaattcactccagggtttgaatataggaagtgaa
ctgttggagcatgctgtgatacttgcaacaaatgataaccttgatcttgggtgtgcagcg
attgagcatgctgctgcagaaagggcagtaatagcgattgattcagaaatcgagcaacag
ctctctgcaagaagaaagcaccgagatggtgttggtgcagcttttttcgatgcaaacata
tattcacaaagttctatgagtcttgtgcctgaggcccttcggcccaaacctggtcacctt
tctgtctctcaacagcgagtttatgaggactttcttcggcttccattgcaaagtcaatct
agccagagttcacatactttactagcaagttcctcaacttctgctggctctactgctatg
gctggtacatacagttcagggtcagggattgtcaatataggccagtcgtcagctcctgga
aatgttgggtttgaagcagtatctcgggcaatagatattactactgatccgattgagtct
aattcagctgcattttttagttctcctattcatagtggggttgatggtgctaatcagcaa
agttctgaaaatgaatccgtcagtgttccattttcttctgctgctccagtccctgaactt
cattcgggggacgcttctgatggtttaaaggagacgggaatttctttacaaccaatatct
tcgtcaactgcttctgatcggcttgtgagtggcagttcagacccttcattgagtacgagg
gatgcattggataaatatcagattgttgcacagaagttggaggctttggttatgagtgat
ggcaaagaagcagaaatccagggcctaattactgaggttcctgagatcatcctcagatgt
gtcagtcgagatgaggcagctttagctgtggctcaaaaggttttcaagggtttatatgaa
aatgcatcaaacaattttcatgtcagtgcctgtcttgcaattctggccactattcgtgat
gtttgcaagcttgtagtcaaagaactcactagctgggtcatttactcagatgaagagcgg
aagtttaacaaagatattactgttggccttatacgcagtgaattgctcaatcttgcggag
tacaatgttcatattgcgaaacttattgatgggggaaggaatagtaagggtgcaactgaa
tttgctgtctcacttatccaagctttagttgtcgaggattcgaaagttatttctgaactc
cacagccttgttgatgcactggctaagcttgctgcaaaaccgggatccgctgagtcatta
caacagcttattgagattgtcagaaatcctgttactaattctgccgtcttatctggtttt
actgtcggaaaggaggaaaaggtcagacagtctagagataaaaagtcttcaaatcagctt
acctctaacagggaagaacacgtcattgttgattctgcagaaccagatcctgctggtttc
cgcgagcaggtctccatgttatttgcggattggtaccgcatttgtgaactcccaggtgca
aatgatgcagcttccaatcattatatcctacaattgcatcaaaatggactgttgaaggga
gatgatatgacagagcgtttttttcgtatccttacagaactttctgtttcacattgcttg
tcttcggaggttattaattctggtgcattgcaatcatctcaacaagggcagactttgtcc
ttccttgccattgatatttttgcaaagcttgtcttctcaatcttaaaggtggagcaggga
tcaagcaggttttttcttttatccaagattttgggtgtgactgtgagattaatacagaag
gattccgaggagaagaaaatatcttttaatccaagaccgtatttcagattgtttgtgaac
tggcttttggatcttgtttcctcagatccagttattgatggtgcaaattttcagatcttg
acagcctttgccagtgcatttcataacttacagccccttaaagttcctccattcagcttt
gcatggctcgagttggtgagccataggagcttcatgccaaaattacttactggaaatgct
cagaagggttggccctttgtccagcgcttgctagtagacttgtttcaattcctggagcca
tttttaaggagtgctgaactaggaatgccagttcactttctttataaaggtacacttagg
gtactgctggtacttcttcacgatttccccgaattcctatgtgattatcatttcacgttt
tgtgatgtgattcctccaagctgcatacaaatgcgtaatattatccttagtgcatttccc
cgcaatatgagacttccagatccatctactcccaatttgaagattgatttgctacctgaa
ataagggaggctcctcatattctctctgaggttgatgcagctcttaaagcaaagcagatg
aaagctgatgtggatgagtatctgaagacgaggcagcagggttcttcattcctgactgaa
ctgaagcagagattactgctttcaccaagtgaagctgcttctgctggcactcgctacaat
gtaccattgatcaactcgcttgtgctttatgctgggatgcaggccatccagcagctgcaa
gcaagagcacctcattcccagtcaacagggaacactgcacctttagctgtattattggta
gatgctgctttggatatttaccagactcttgtactggaactcgacactgaagggagatac
ctctttctgaatgctgtcgctaatcagttgcgctatccaaacaaccacacgcattacttc
tcttttgtcctcctttatttattcgctgaatcgaaccaggaaatcattcaggagcaaatc
accagagttttattggagcgcttaatagttaatagacctcatccgtgggggcttctgatt
acttttattgagctcatcaagaatcctagatataacttctggaaccgatctttcataaga
tgtgcaccagagatcgagaaactcttcgagtcagttgcaagatcatgtggtggcttaaag
cctatggatgagagtatggtctcaaactgggcttctgagggcacacgctga
DBGET
integrated database retrieval system
