Methylomonas sp. EFPC1: JWZ98_06480
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Entry
JWZ98_06480 CDS
T10319
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K12146
hydrogenase-4 transcriptional activator
Organism
meep Methylomonas sp. EFPC1
Brite
KEGG Orthology (KO) [BR:
meep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
meep03000
]
JWZ98_06480
Transcription factors [BR:
meep03000
]
Prokaryotic type
Helix-turn-helix
Other families
JWZ98_06480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
PAS
AAA_5
PAS_8
PAS_9
PAS_4
HTH_8
AAA_2
AAA
Mg_chelatase
nSTAND3
PAS_10
Diguanyl_cycl_sensor
AAA_30
AAA_16
TIP49
AAA_3
AAA_22
AAA_7
Motif
Other DBs
NCBI-ProteinID:
QSB02584
LinkDB
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Position
1368429..1370216
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AA seq
595 aa
AA seq
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MTHKRQRDKPLILMLDDNPVNLEELAGLVDEAGFDVLRAETGEIALVQAVAQLPDLILLD
VLMPGMDGFTVCQTLKTIPTTRDIPVLFMTALADTADKLKGFQVGAVDYITKPFQYEEVL
ARVQTHLTLQKLKLELQEKEQRLSRIFENAMDAILTLDDIGRITLFNAAAEQMFRCKAAD
SIGRAVDRFLSPELYKTLTNFRNGVPAEQAIWVSEGMSAVRADESTFPIEATISRVEAIG
QKLYILILRDINERKARQQAEAECNTLRGINLYLQEEVLASRDGEELIGNSPALHQAMDL
VRQVANTDATVLITGETGTGKELIARAIHNLSARKDKTLVKLNCATIPENLAESELFGHE
KGSFTGAIARKLGRFELANGGTLFLDEIGELPLEMQAKLLRVLQEGEFERVGGTQTLTCD
VRVIAATHRDLAQFSQQGKFRADLYYRLNVFPINLPPLRERKEDVPFLVKHFIDKYAAKF
GKKIQSIPERMMADLQSYFWPGNIRELQHIIERAVILTKGSQLAAVDCVNLMGAGGAPNA
APIVTLDEAERAHILKALEATSWRIAGNQGAAKILGVPSTTLRSRMEKLGISKPA
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgactcataagcgccagcgcgataaaccgttaatcttgatgctggacgacaatccggtt
aacttggaagagttggcaggcttggtcgatgaagccggctttgacgtattgcgtgcggaa
acgggcgaaattgccttggtccaagccgtggcccaattgccagacctgattctgctggat
gtgctgatgccgggcatggacggttttaccgtctgccagaccttgaaaaccattccgacg
acgcgcgatattccggtgttattcatgacagccttggccgataccgccgataaattaaaa
ggttttcaagtcggggcggtggattacatcaccaagccgtttcaatacgaagaagtgctt
gcccgcgtgcaaacccatctgacgctgcaaaagttgaagctggagttgcaagaaaaagag
cagcgcctgtcgcggattttcgagaacgcgatggatgcgattctgacgctggatgacatc
gggcggattaccttattcaacgcggcggccgaacagatgtttcgctgtaaagccgccgac
agcattggccgggcggtggatagatttttgtcgcccgagctttacaaaacgctaaccaat
tttcgcaatggcgtgccggccgagcaggccatttgggtgtcggaaggcatgagtgcagta
cgcgcggatgagagtacttttcccattgaagccaccatttcccgcgtggaagccattggg
cagaaactgtatatcctaattttgcgtgacatcaacgaacgtaaagcccggcaacaggcc
gaagcggaatgcaacaccctgcgcggcatcaatctttatctacaagaagaggtattagcc
agccgcgatggcgaggaattgatcggcaattctccggcattgcatcaagcgatggatctg
gtcaggcaggtagccaacaccgacgcaacggtgttaatcaccggtgaaaccggtaccggc
aaggaattgattgctcgggcgattcacaatctcagcgctcgcaaagacaaaaccttggtg
aaattaaattgcgcgacgatcccggaaaatctcgccgaaagcgagttgttcggtcacgaa
aagggctcgtttaccggggcgatcgcccgcaaattgggacgttttgaactggctaacggc
ggtaccttgtttctggatgaaatcggcgaattaccgctggagatgcaggccaaattattg
cgggtgctacaggaaggcgaatttgaacgggtgggcggcacgcaaacgctgacttgcgac
gtacgggtcatcgccgctacccaccgggatttggcgcagttttcccaacaaggtaaattt
cgggccgacttgtattaccgtttaaatgtgtttcccatcaatttgccgccgctgcgcgaa
cgcaaggaagacgtgccgtttttggtgaagcatttcatcgataagtacgcggcaaaattt
ggtaagaaaatccagtcgattccggagcggatgatggccgatctgcaaagttatttctgg
cccggcaatattcgcgagctgcaacatatcatcgaacgtgcggtgattttaaccaagggc
agtcaactggccgccgtggattgcgtgaatctgatgggggccggcggcgcgcccaacgct
gcaccgattgtcacgctggacgaagccgagcgcgcgcatattctgaaagcgctggaagcc
acgtcctggcgaatcgccggtaatcagggggcggcgaagattttgggggtgccatccacg
actttgcggtcgcggatggagaagctggggattagtaaaccagcctga
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