Methanochimaera problematica: F1737_08070
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Entry
F1737_08070 CDS
T09667
Symbol
prf1
Name
(GenBank) peptide chain release factor 1
KO
K03265
peptide chain release factor subunit 1
Organism
mefw
Methanochimaera problematica
Pathway
mefw03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mefw00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
F1737_08070 (prf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mefw03019
]
F1737_08070 (prf1)
03012 Translation factors [BR:
mefw03012
]
F1737_08070 (prf1)
Messenger RNA biogenesis [BR:
mefw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
F1737_08070 (prf1)
Translation factors [BR:
mefw03012
]
Eukaryotic type
Release factors
F1737_08070 (prf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
DUF7479
Motif
Other DBs
NCBI-ProteinID:
WOF16647
UniProt:
A0AA97FD27
LinkDB
All DBs
Position
complement(1588563..1589834)
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AA seq
423 aa
AA seq
DB search
MAEELELDSARKRYEFKKTLERLAEKEGSGTELISIYIPPDKQIYDVTAQLRDEFGQCAN
IKSKQTRTNVQSAISSVLSRLKYYNRPPESGLAVFCGAVKLGGDRTDMDCTIIEPPEPVN
LYMYRCSSNFELEPLKQMLVEKEVYGLLVIDRRESFLGFLRGNRIEAISGVTSTVPGKQR
KGGQSAMRFQRLRLIAINEYYKKVADRATDIFMAEPEFYERFKGVLIGGPTPTKEEFNDG
GYLHHELQKRVIGLFDVAYTNESGLAELVDNASDALKGVEVMKEKVLMDRFFKELVKDES
LAAYGEDSVRKNLEIGAVDTLLLSAVLRKERLKIKCQNCDYFREETVQVEPGKKVTDIEL
GICPKCSAPVFIDEESDIIDELAELADSSNSKVMIISEDFEEGAMLYNAFGGIAAILRYR
TGY
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagaattagagctggacagtgcgagaaaacgatatgagttcaaaaagactctt
gagagactcgccgaaaaggaaggaagcggcacagaattaatttcaatatacattccgccg
gacaagcagatctacgatgttaccgcacagctcagggatgagtttggacagtgtgcaaac
atcaagagcaagcagacaagaacgaatgttcagagtgcaatatcttcagtactctcaagg
ctgaagtattataacagacctcccgagagcggactggcagtattctgcggtgcagtaaaa
cttggcggtgacagaaccgatatggactgtacaataattgaaccccctgagcctgtcaat
ctgtatatgtacaggtgctcttcaaattttgagttagagcccctaaagcagatgcttgtt
gaaaaggaggtttacgggcttctggtcattgaccgaagggagtcattcctcgggtttttg
agaggaaaccgtatagaagccatttcaggagttacctcaacagtccccggaaaacagaga
aaaggtggtcagtccgcaatgcgtttccagagactgcgtcttattgccatcaatgaatac
tataagaaagttgcagaccgtgcaactgatatattcatggcagagcctgagttctacgag
aggtttaagggtgttctaatcggcgggccgacgcctacaaaagaggagttcaacgatggg
ggatacctgcatcatgagcttcagaaacgtgtgatcggtctttttgacgttgcctataca
aacgaaagcggtcttgccgagcttgtggacaatgcctcagatgccctcaagggtgtcgag
gtcatgaaggaaaaggtcttaatggatcgtttcttcaaagagcttgtaaaagacgagagc
cttgcagcatacggtgaggacagtgtcagaaagaatctagaaataggtgctgtcgatacc
cttcttttatcagcagttctaagaaaagagcgccttaaaatcaaatgccagaactgtgat
tatttccgtgaggagacagttcaggtcgaacctggaaagaaggtcacagatattgagctt
ggaatctgccccaaatgctccgctcctgtgttcattgatgaggaatctgatatcattgac
gaacttgcagagcttgctgactccagcaacagcaaagtgatgattatttcggaagatttc
gaggaaggtgcgatgctttacaatgcatttggaggcattgccgcaattctcagatacagg
acaggatactaa
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