Methylovirgula sp. HY1: MHY1_00512
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Entry
MHY1_00512 CDS
T11446
Symbol
rng
Name
(GenBank) Ribonuclease G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
mehy Methylovirgula sp. HY1
Pathway
mehy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mehy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MHY1_00512 (rng)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mehy03019
]
MHY1_00512 (rng)
03009 Ribosome biogenesis [BR:
mehy03009
]
MHY1_00512 (rng)
Enzymes [BR:
mehy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
MHY1_00512 (rng)
Messenger RNA biogenesis [BR:
mehy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MHY1_00512 (rng)
Ribosome biogenesis [BR:
mehy03009
]
Prokaryotic type
rRNA processing factors
MHY1_00512 (rng)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QXX73714
LinkDB
All DBs
Position
complement(537401..540388)
Genome browser
AA seq
995 aa
AA seq
DB search
MANKMLIDAAHPEETRVVVLRGNRVEEFDFEAANKKPLRGNIYLAKVTRVEPSLQAAFVD
YGGNRHGFLAFSEIHPDYYQIPVSDRQALLDEDALAHRDDDDDEAHATQKRSRRHRRGGR
NNEHAEKRRISDDETLADTEQAEFGTANSTPGADEFASNEPVAEPMAHDIGRDSEPLSAE
FSAITETSDDEGRSAEGLRSTAMPGSESPRGAGEADRDDDESAERSELDAQSNDHARDGD
ERPSAHRLATDPEGFAVVEDQDDVSDAGAAGREDDYEARFRPARHSDDDEEGDEEADQVE
QIGGDAMEEVPMRMHRSRRQYKIQEVIKRRQVLLIQVVKEERGNKGAALTTYLSLAGRYS
VLMPNTARGGGISRKITDAGDRQRLKAIAQELEVPEGMGVILRTAGAARTKAEVKRDFEY
LLRMWETVREVTLKSTAPTLVYEEGSLVKRAIRDLYNKDIDEVIVSGDAAYREAKEFMRM
LMPSHAKNVQPYRDPQPIFAKSGVEAQLDAMFSNHVSLKSGGYLVINQTEALVAIDVNSG
RSTREHNIEDTALRTNLEAADEVARQLRLRDLAGLIVVDFIDMEESRNNRSVERRMKDAL
KNDRARIQIGRISHFGLLEMSRQRIRTGVLEGSTAPCPHCAGAGMVRSTASIALHVLRIL
EDALIKSSAHNITVRTRSEVALYILNQKRAHLSELEQRFGVSVTIIADDSLTGTAYHAME
RGEPAAGVVEPPRLIAPPAPVDDEAFADDVSDDDEESETESPTEESEQSEGPRRRRRRRR
RGRDREATGISANAPQPSDDALAFVTQFGNIGARPLADAEIGEPAEDHVASLAGEPAPKR
EGRRRRSRRRNGRGPNEITDEAISEAATEVVADLDLERATTSPAEVAADWPVDSVANSFA
SENRTDVFAETAFPSVPADENASVPGPISPAPAFQLEPTTQKEDAADAFARPRELAEERS
TAPEPALSTAQPGAADSNQPKRTGWWQRAKASLRG
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atggccaacaaaatgctcatcgatgccgcccacccggaagaaacccgggtggtcgtgctc
cgcggtaaccgagtcgaggaattcgatttcgaggcggcgaataagaagcctctccgcggc
aatatctatcttgccaaagtcacccgcgtggagccttcgctccaagcggccttcgtggat
tacggcggcaaccggcatggctttctcgccttttccgagattcatccggactattaccaa
atcccggtttccgaccgtcaggcgctgctcgacgaggatgccctcgcgcatcgcgacgat
gacgacgacgaggctcacgccacccaaaaacgcagtcgccgccatcgccgcggcggccgc
aataacgagcacgccgagaagcgccgtatcagcgatgacgagaccctcgctgatacggaa
caggccgaattcggcactgccaattccacgcccggagccgacgagttcgccagcaacgaa
cccgttgcggagcctatggcgcatgacataggccgcgacagcgagcccttgtcggcagag
ttttctgctatcaccgaaacaagcgacgacgaaggccgatccgccgaagggctgcgttcc
accgctatgccgggatccgagagtcctcggggcgccggcgaggcggatcgagacgatgac
gaatctgccgagcgaagcgaactcgacgctcaaagcaatgatcacgccagagatggcgac
gaaaggccgtcggcacatcggctcgccaccgatccggagggcttcgccgtcgtcgaagat
caggacgacgtgagcgacgccggtgcggctggcagagaagatgattatgaagcgcggttc
cgtcccgcacggcacagcgacgatgatgaagagggcgacgaagaagccgatcaggtcgag
cagatcggtggcgacgcgatggaagaagtgccgatgcggatgcatcgcagccgtcgccaa
tacaagattcaggaagtcatcaagcgccgccaagtgctcctcatccaggtcgtgaaggaa
gagcgcggcaacaagggcgccgctttgaccacctatctgtcgctcgccggccgctattcg
gtgttgatgccgaacaccgcgcgcggtggcggcatttcccgcaagatcaccgatgccgga
gatcggcagagattaaaggccatcgcccaggaactcgaagtgccagaaggcatgggcgtc
atcttgcgcacggccggcgcggcgcgcaccaaggccgaggtcaaacgcgatttcgaatat
ctcctgcgcatgtgggaaaccgtgcgcgaagtgacgctgaaatcgaccgccccgacgctc
gtctatgaggaaggttcgctcgtcaagcgcgccatccgcgacctttacaacaaggacata
gacgaggttatcgtgtcgggcgacgcagcctatcgcgaggccaaggaattcatgcgcatg
ctcatgccgagccatgccaagaacgtccagccttatcgcgacccgcagccgatcttcgcc
aaatcgggtgtcgaagcgcagctcgacgcgatgttctccaaccacgtgtctttgaagtcg
ggcggctatctcgtcatcaatcagaccgaggctctggtcgcgatcgacgtcaattcggga
cgttcgacccgcgagcataatatcgaagacacggcgttgcgcaccaatctcgaagccgcc
gacgaagttgcccgtcagctgcgcctgcgtgatctcgccggcctcatcgtcgtcgatttc
atcgacatggaggagagccgcaacaatcgttccgtcgagcgccgaatgaaggacgctctg
aagaacgatcgggcgcgcatccagatcggccgcatctcgcatttcggcctgctcgaaatg
tcgcggcaacgaatcagaaccggcgttctcgaaggctcgaccgcgccgtgcccgcattgc
gccggcgccggcatggtccgttcgacggcctcgatcgctctgcatgtcctgcgcattctc
gaagatgctcttatcaagagttcggcgcataacatcaccgtgcgtacacgatccgaagtg
gcgctctacatcctcaatcaaaagcgcgctcatctcagcgagctcgaacagcgcttcggc
gtcagcgtgaccatcatcgccgacgacagcctgacggggaccgcctatcacgcgatggaa
cggggcgagccagcggcgggtgtcgtcgaaccgccacgcctcatcgcgcccccggccccc
gtcgacgacgaggctttcgccgatgacgtctccgacgacgacgaggaatccgagaccgaa
agcccgacggaagagtccgagcaaagcgaagggcctcgccgccgccgccgccgccgtaga
cgggggcgcgacagagaggcaaccggtatcagcgccaatgcgccacagccctccgacgac
gctttggcttttgtcacacaattcggcaatatcggtgcacgccccctggcggatgcggaa
atcggcgagccggcggaagaccatgtggcgtctctggctggcgagcccgcgccgaagcgc
gagggccgcagacggcggtcgcgtcggcgcaatggccgtggcccgaacgagatcaccgat
gaggcgatcagcgaggctgcgaccgaagtcgtcgccgacttggatctggaaagagccaca
accagccccgcggaagtcgcagccgattggcccgtagattccgtggccaatagcttcgca
agtgagaacagaacagacgtgtttgccgagaccgccttcccgagtgttccggcggatgaa
aacgcttccgtgccggggccaatatctccggcgcctgcgtttcagcttgagccgacgacg
cagaaagaagatgcggctgatgctttcgccaggccacgtgaattggccgaagaaagatcg
accgcgcccgaacctgcattgtcgaccgcgcagccaggcgccgcggactccaatcagccg
aaacggaccggctggtggcaacgcgcaaaggcttctttgcgcggatga
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