Methanosarcina sp. Kolksee: MSKOL_0876
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Entry
MSKOL_0876 CDS
T03821
Name
(GenBank) Eukaryotic peptide chain release factor subunit 1
KO
K03265
peptide chain release factor subunit 1
Organism
mek
Methanosarcina sp. Kolksee
Pathway
mek03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mek00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
MSKOL_0876
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mek03019
]
MSKOL_0876
03012 Translation factors [BR:
mek03012
]
MSKOL_0876
Messenger RNA biogenesis [BR:
mek03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
MSKOL_0876
Translation factors [BR:
mek03012
]
Eukaryotic type
Release factors
MSKOL_0876
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
baeRF_family10
eRF1_1
acVLRF1
Zn_ribbon_LysW
HMBD
HypA
SLX1_C
Motif
Other DBs
NCBI-ProteinID:
AKB46653
LinkDB
All DBs
Position
complement(1096460..1097569)
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AA seq
369 aa
AA seq
DB search
MREEHEQASNIKSKLTGNNVQGTLDFLLAKLRSLNKIPENGIVYFAGTVSAGANRTGMVN
EVLFSPEPVVDYIYHCDSIFYLEPLEEMLRECSTYGLILLDLREATIGMLVGRQTEVIKH
LHSTVPGKQRKGGQSAHRFEQLRRISIHDFYKRIGNAASEAFLEVEPSELKGILIGGHSP
TKEEFNEGGFLHYELQKKVLGLFDTGYTDESGFSELINAAEDTLQGIDLIKQKKNMKLFY
KELATESGKVSYGEDSVRANLELKAVDVLLLSEDLRSERVTLKCSVCGYENKRTRKWKSN
EAVPAAGNCPECGSALEVTDTTDIVGEFSELADIGNARTAFISTDFDEGSQLMIAFGGIA
AILRYSTGV
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
ttgagagaagaacatgagcaggcttcaaacattaagtcaaaacttaccggcaataacgta
cagggaacccttgattttttgttggcaaagttaagatctcttaacaaaatacccgaaaac
gggatagtttattttgcaggaactgtcagtgccggagctaacaggacaggcatggtaaat
gaagttcttttttctccggaacctgttgtagattacatatatcactgtgattccattttt
tatcttgagccccttgaggaaatgctcagagagtgcagtacttatgggctcatacttcta
gatctaagagaagcaactatcggtatgcttgtgggcaggcaaactgaggttattaagcat
ctccactccaccgtccctggaaaacaaagaaaaggagggcagagtgcacatcgttttgaa
cagctcagacgcatttcgattcatgatttttacaaaagaatagggaatgctgcaagtgag
gcatttcttgaagtggagccatctgaacttaaaggcattcttataggagggcattccccg
actaaagaagagttcaatgaaggtggatttctacattatgagcttcagaaaaaggttctt
ggacttttcgatacagggtatacggatgaatcaggtttttctgagttaataaatgcagca
gaggatacactccagggtattgacttgattaagcaaaagaaaaatatgaaattattttat
aaagaactcgctactgaatctggtaaagtatcttatggagaagacagtgtaagggcaaat
ctggaactaaaggcagttgatgtgcttttactttctgaagacctgcgatctgaaagagta
actctcaaatgcagtgtttgcggatatgagaataaaagaacaagaaaatggaagtccaat
gaagctgttcctgcggctggaaattgccctgaatgtggttctgcacttgaagttacggat
actactgatatcgttggcgaattctcagaactcgctgatataggcaatgcaaggactgct
tttatatcaacagatttcgacgaaggttctcaacttatgatagctttcggtggaattgct
gcaatccttagatatagcacaggggtgtag
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