Methanoculleus marisnigri: Memar_2212
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Entry
Memar_2212 CDS
T00477
Name
(GenBank) peptide chain release factor subunit 1 (aeRF-1)
KO
K03265
peptide chain release factor subunit 1
Organism
mem
Methanoculleus marisnigri
Pathway
mem03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mem00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
Memar_2212
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mem03019
]
Memar_2212
03012 Translation factors [BR:
mem03012
]
Memar_2212
Messenger RNA biogenesis [BR:
mem03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
Memar_2212
Translation factors [BR:
mem03012
]
Eukaryotic type
Release factors
Memar_2212
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
DUF915
Motif
Other DBs
NCBI-ProteinID:
ABN58135
UniProt:
A3CXN5
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All DBs
Position
2203156..2204409
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AA seq
417 aa
AA seq
DB search
MDTPRKRYEFKKMLERLAEKEGSGTELITLYIPPDKQIYDVTAQLRDEFGQCANIKSKQT
RTNVQSAISSILSRLKYYKRPPEHGMAVFCGTINVGGDRTDLDCEIIEPPEPLNTYMYRC
SSSFELEPLEQMLGEKEVYGLIVLDRREAYVGFLRGSRIEPVRGVTSTVPGKQRKGGQSS
VRFQRLRLIAINEFYKKIGDLASEVFLAEKDFFERFKGVLIGGPTPTKEEFEAGGFLHHE
LQKRIIGLFDVSYTNESGLAELVENASDALKGLDIIKEKAVMNRFLQELVKDDGAAAYGE
ESVRKNLELGAVDTLLLSDKLRRARLKLACQNGDYTEERTVSIEPGKHIKDLDLGTCPKD
GGSLYVAEEADIIDELTTLADQSSTTVRIISDDFEEGSMLYNAFGGIAAILRYRTGY
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggatacgccgcgaaagcgctacgaatttaagaagatgcttgagaggctggcggagaag
gaagggagcggcaccgagctgatcaccctgtatatacctccggataagcagatatacgac
gtgaccgcccagctccgcgacgagttcgggcagtgcgccaacatcaagagcaagcagacc
aggacgaacgtccagagtgccatatcctccatcctctcccgcctgaaatactataagcgc
ccgccggagcacggcatggcggtcttctgcggcacgatcaacgtcggcggcgaccgcacc
gacctcgactgcgagatcatcgagccgcccgagccgctcaacacctacatgtaccgctgc
agctcctcgttcgaactcgagccgctggagcagatgctcggggagaaagaggtctacggc
ctcatcgtccttgacagaagggaagcctacgtcgggtttctccggggcagccggatcgag
cctgtccgcggagtcacctcgaccgtacccggcaagcagcggaaaggtggacagtcgagc
gttcgtttccagcggctgcggctgatcgccatcaacgagttctacaagaagatcggcgac
ctcgcgagcgaggtcttcctcgccgagaaggacttcttcgagcggttcaaaggcgtgctg
atcggcggcccgacaccaaccaaggaggagttcgaggccggcggtttcctccaccacgag
ctgcagaagcggatcatcgggctcttcgacgtctcctacacgaacgagtccgggcttgcc
gaactcgtcgagaacgcgtcggatgccctgaaaggcctcgatatcatcaaggagaaggcc
gtgatgaaccggttcctccaggaactggtcaaggacgacggagcggccgcttacggggaa
gagagtgttcgaaagaacctggaactcggtgccgtcgacaccctcctcctctccgacaaa
ctccggagagcccggctgaaacttgcctgccagaacggcgattacaccgaggagcggacg
gtcagcatcgaaccgggcaaacacatcaaagacctcgacctcggcacctgccccaaagac
ggcggatcgctctacgtggccgaagaggccgatatcatcgacgaactgaccacgctcgcc
gaccagagcagcacgacggtcaggatcatctcggacgacttcgaagaaggttcgatgctt
tacaacgcattcggcgggatcgctgcaatcctgcgctacaggacaggatactaa
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