Methanoculleus bourgensis MAB1: MMAB1_0853
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Entry
MMAB1_0853 CDS
T04314
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mema
Methanoculleus bourgensis MAB1
Pathway
mema03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mema00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MMAB1_0853 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mema03019
]
MMAB1_0853 (recQ)
03400 DNA repair and recombination proteins [BR:
mema03400
]
MMAB1_0853 (recQ)
Enzymes [BR:
mema01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MMAB1_0853 (recQ)
Messenger RNA biogenesis [BR:
mema03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MMAB1_0853 (recQ)
DNA repair and recombination proteins [BR:
mema03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MMAB1_0853 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
Helicase_C
DEAD
HRDC
RecQ_Zn_bind
HEM4
ResIII
Helicase_Sgs1
HHH
Glyco_hydro_57
Motif
Other DBs
NCBI-ProteinID:
CVK32067
UniProt:
A0A0X3BIU8
LinkDB
All DBs
Position
1:706715..708946
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AA seq
743 aa
AA seq
DB search
MDPLYAALEHYYGYTSFLPFQEEIVRDILRKRDVLAVLATGGGKSLCYQLPALVTGGLTV
VVSPLISLMKDQVDTLVTQGVPAATLNSTLPYDAMVKTLADLEAGRLRLLYVSPERVVQP
RFLAALRESGVTLVAVDEAHCISEWGHQFRPEYRQLSVLKEQFPEVPMIALTATAIPEVR
QDIIRQLSLADPAVYVGSSNRENLRYTVAGKKDAYPQLIDYLRSNPNRSGIVYFSSKKRT
EEIAERLRNDGVRALPYHADLPDNYRHRVQEQFIRDEIDVVCATNAFGMGIDKPDVRFVI
HYDMPKSLEAYAQETGRAGRDGEASDCILFYSPGDRRKNQVMLERDSLDRPDLYPVAVQK
LNDMAAFCETTRCRREYLLRYFGETFTGVPCGGCDICLQPDEFIDGREIAEKIVRCISGL
PGPFGITHIADILAGSKSSRVLARGHQDLPSYNSGSEYSSNQWSSFIRQLIATGYLDQSS
GKYPVVTLNVRSRAVLSGGESVRLARPEDSRARDRGNGPDERPFDAELFEELRSVRKRLA
DDLSVPPYVVFHDRTLKEMARRYPQTLEEFAAIPGVGSAKLERFGEIFVAAIGNCRPPVP
DAGGAAARPGGEPGGSLPSAQPVAPADPDKIPDDLLLEEAYALQGYIRELREELRRAEDL
HKALLARARETGIRENEAYALATEISRRRHIVTERFYERYPEVFVKIAKVTISAAEQAVG
KEALEECVEYEESEKVSVRNKAA
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atggaccccctctacgcagccctcgagcactattacggctacacctcgttcctccccttc
caggaagagatcgtccgcgatatcctccggaagagagacgtcctcgccgtccttgcgacc
ggcgggggcaaatccctctgctaccagctccccgctctcgtgacgggcgggctcaccgtc
gtcgtctcgcccctgatctcgctcatgaaggatcaggtcgacaccctcgtgacgcagggg
gtccctgcggccaccctgaacagcacgctcccctacgacgcgatggtgaagaccctcgcg
gacctcgaggcgggccggctccgcctgctctacgtctcgcccgagagggtggtccagccc
cggttcctcgccgccctccgcgagtcgggcgtgaccctcgttgccgtcgacgaggcgcac
tgcatctccgagtggggccaccagttccggccggagtaccggcagttgagcgtcttaaaa
gagcagttcccggaggtcccgatgattgccctgacggcgaccgcgatccccgaggtccgg
caggacatcatccggcagctcagcctcgcggaccctgcggtctacgtcgggagttccaac
cgcgagaacctccggtataccgttgccggcaagaaagacgcgtatcctcaactcatcgac
tacctgaggagcaaccccaaccggtcggggatcgtctacttctcaagtaagaagcggacg
gaagagatcgccgagcggctgcgcaacgacggggtccgggccctgccctaccacgcggac
ctgccggacaactaccgccaccgggtgcaggagcagttcatccgcgacgagatcgacgtg
gtctgcgccacgaacgccttcgggatggggatcgacaagcccgacgtccggttcgtcatc
cactacgacatgccaaagagtctggaggcgtatgcgcaggagaccgggcgtgcagggagg
gacggcgaagcaagcgactgcatcctcttctacagcccgggggaccggcgaaagaaccag
gtcatgctcgagcgggacagcctggaccggccggacctctacccggtcgccgtgcagaaa
ctcaacgatatggcggccttctgcgagaccacccggtgccgccgggagtacctcctcagg
tacttcggcgagaccttcaccggggtgccgtgcgggggctgcgacatctgcctgcagccg
gacgagttcatcgacgggcgggagatcgccgagaagatcgtgcgctgcatctccgggctg
ccgggaccgttcggcattacacacatcgcagatatcctcgccggctcaaagagcagcagg
gtgctcgcgagaggccaccaggatctgccgtcgtacaactccgggagcgagtattcaagc
aatcagtggtcttcgttcatacggcaactcatagcgacgggctacctcgaccagagttcc
gggaagtacccggtcgtcactctgaatgtgcggagccgggccgtcctctccggcggcgag
agcgtgcggctcgcgaggccggaggattcccgggcccgcgaccgtgggaacggcccggac
gagaggccctttgacgcagaactctttgaggagctgcgaagcgtccggaaaaggcttgcg
gatgacctgagcgtcccgccctacgtggtcttccacgaccggaccttaaaagagatggcc
cgccggtatccgcagacgcttgaagagtttgcagccattcccggcgtcgggagtgcgaaa
ctggagaggttcggcgagatcttcgtcgccgcgatcgggaattgccggcctccggtgccg
gatgccgggggtgcagcggcacgccccggcggggagcccggcggatctctgccgtccgcg
caaccggtcgccccggcggaccccgacaagatccccgacgacctcctcctcgaagaggcc
tatgcgctgcaggggtacatccgggagctgcgcgaggagctccgccgggccgaagacctc
cataaagcgctgctcgcgcgagcacgcgagacgggcatccgggagaacgaggcctatgct
ctggcgacggagatcagccggcggcgtcatatcgtcacggaacggttctacgagcgctat
ccggaggtctttgttaagatcgcgaaggtcacgatcagcgccgccgagcaggcggtcggg
aaggaggcgctcgaggagtgcgtcgagtacgaggagtcggagaaggtgagcgtcaggaac
aaggcggcgtag
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