Methylocystis sp. MJC1: OGR47_08980
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Entry
OGR47_08980 CDS
T11178
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
memc Methylocystis sp. MJC1
Pathway
memc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
memc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
OGR47_08980 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
memc03400
]
OGR47_08980 (ung)
Enzymes [BR:
memc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
OGR47_08980 (ung)
DNA repair and recombination proteins [BR:
memc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
OGR47_08980 (ung)
Prokaryotic type
OGR47_08980 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
PTHB1_CtH
Motif
Other DBs
NCBI-ProteinID:
UZX13555
LinkDB
All DBs
Position
complement(1860115..1860783)
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AA seq
222 aa
AA seq
DB search
MTKPVRIDESWKRHLATEFEKAYFTDLREFVRVEYASCAVYPPAAQIFRAFDECPFDEAK
VVILGQDPYHGPGQANGLCFAVGAGVAPPPSLQNIFKEIEADLGHPVSRDPDLSRWAKQG
VLLLNATLTVRASQAGSHQNKGWEQFTDAAVHALSREREGIVFMLWGSYARRKGAGIDRR
KHLVLECAHPSPLSAHNGFFGCKHFSKANKYLVAHGQTPIEW
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagcccgttcgcatcgacgaaagctggaagagacatctcgccaccgaattcgag
aaggcctatttcaccgaccttcgcgagttcgtgcgcgtggaatacgcttcctgcgcggtc
tatccgccggcggcgcagatttttcgcgctttcgacgaatgtccctttgacgaagcgaag
gtcgttatcctcggccaggacccctatcacgggcccggccaggcgaatgggctttgcttc
gcggtcggcgccggcgtcgccccgccgccttccttgcagaacatcttcaaggaaatcgag
gccgatctcggccatcctgtgtcccgcgacccggacctctcgcgctgggcgaagcagggc
gtgctgctcctgaacgcgacgctcaccgtgcgcgcgtcgcaggcgggctcgcatcagaac
aagggctgggagcaattcactgacgccgccgtccatgcgctgtcgcgcgagcgtgagggg
atcgtcttcatgctctggggctcttatgcgcggcgcaagggcgccggcatcgaccgccgc
aagcatctcgtgctcgaatgcgcccacccctcgccgctgtcagcgcataatggctttttc
ggctgcaagcatttctccaaggcgaacaaatatctcgtcgcgcatgggcagacgccgatc
gagtggtga
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