Micromonospora endophytica: Jiend_02030
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Entry
Jiend_02030 CDS
T08807
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
meno
Micromonospora endophytica
Pathway
meno00040
Pentose and glucuronate interconversions
meno01100
Metabolic pathways
meno02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
meno00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
Jiend_02030
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Jiend_02030
Enzymes [BR:
meno01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
Jiend_02030
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
PT
Motif
Other DBs
NCBI-ProteinID:
BCJ56781
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Position
205584..207131
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AA seq
515 aa
AA seq
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MKRLRILAALATAGVGAAVCVAVMTPQASAAVGSATGFAASNGGTTGGAGGQTVRATTGT
QIHAALCNRASSSTPITIQVEGTINHGNTTKVSGGSCNTAADVIELKQISNVTILGVGNG
AVFDQIGIHIREARNIIIQNVTVRNVKKSGSPTSNGGDAIGMESGVRNVWVDHVTLEASG
GESEGFDGLFDMKDDTQYVTLSYSIMRNSGRGGLVGSSESDRSNGYISYHNNLFENLDSR
VPLLRGGIAHIYNNHYVNIRESGINSRAGGRARVDNNYFQTSKDVLGTFYTSEAGYWQVS
GNIFDRVTWSARSGDTNPAGPNPTSNTSVSIPYSFRLDGANCVPDIVRQTAGANKGIRTS
NGNCTPTNPTTGPTNNPTSGPTNNPTPGPTTPPSGTNLSIGADSDGSSKASGTSYGDVRD
GNMGTAWGPSGATGQISIKWGTATRVSRVNIREASGSVGSIRSWRLLNHDTGAVLATGST
AGVISFTATSLRKITLDITSSSGAPRVAEFETYAS
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgactcaggatcctggcagcactggccacggcaggagtgggggccgcagtctgc
gtggccgtcatgacgccccaggcgtcagccgccgtcggcagtgccaccggcttcgcggcc
agcaacggcggcaccaccggcggtgccggcgggcagaccgtacgcgccaccaccggcacc
cagatccacgcggccctgtgcaaccgggccagcagcagcaccccgatcaccatccaggtc
gagggaaccatcaaccacggcaacaccaccaaggtgtcgggcggcagctgcaacaccgcc
gccgacgtgatcgagctgaagcagatcagcaacgtcacgatcctcggggtcggcaacggc
gcggtcttcgaccagatcggcatccacatccgcgaggcccgcaacatcatcatccagaac
gtgacggtccggaacgtcaagaagtccggctcccccacctcgaacggcggcgacgccatc
gggatggagtccggcgtccgcaacgtctgggtcgaccacgtcaccctggaggcgtcgggt
ggcgagtcggagggcttcgacggcctcttcgacatgaaggacgacacccagtacgtgacg
ctgtcgtacagcatcatgcgcaactccggtcgcggcggcctggtcggttccagcgagagc
gaccgctcgaacggttacatcagctaccacaacaacctgttcgagaacctcgactcccgg
gtgccgctgctgcggggcggcatcgcccacatctacaacaaccactacgtcaacatccgg
gaatccgggatcaactcccgggccggcggtcgggccagggtggacaacaactacttccag
acctccaaggacgtgttgggcaccttctacaccagcgaggccggctactggcaggtcagc
ggcaacatcttcgaccgcgtgacctggtccgcccgcagcggcgacaccaaccccgcgggc
cccaacccgacgtcgaacaccagcgtcagcatcccgtactccttccgcctggacggggcg
aactgcgtgccggacatcgtccggcagaccgccggcgccaacaagggcatccggacctcg
aacggcaactgcacgccgacgaacccgacgaccggcccgaccaacaaccccacctccggg
ccgaccaacaacccgacgcccggaccgaccacgccaccgagcggcaccaacctgagcatc
ggcgccgactccgacggttccagcaaggccagcggcaccagctacggcgacgtgcgggac
ggcaacatgggcaccgcctggggaccgtccggcgccaccggccagatctcgatcaagtgg
ggcaccgccaccagggtctcccgggtcaacatccgggaggcgtccggatcggtaggcagc
atccgctcctggcggctgctcaaccacgacaccggcgccgtgctagccaccggcagcacc
gccggcgtgatcagcttcaccgccacctcgctccgcaaaatcacgctcgacatcaccagc
tcgtccggcgccccccgggtagccgagttcgagacgtacgccagctaa
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