Micromonospora endophytica: Jiend_62990
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Entry
Jiend_62990 CDS
T08807
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
meno
Micromonospora endophytica
Brite
KEGG Orthology (KO) [BR:
meno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
meno03051
]
Jiend_62990 (pafA)
Enzymes [BR:
meno01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
Jiend_62990 (pafA)
Proteasome [BR:
meno03051
]
Prokaryotic proteasome
Bacterial regulatory particles
Jiend_62990 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Phage_int_M
Motif
Other DBs
NCBI-ProteinID:
BCJ62877
LinkDB
All DBs
Position
complement(6487106..6488464)
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AA seq
452 aa
AA seq
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MERRIFGLETEYGVTCTYRGQRRLSPDEVARYLFRRVVSWGRSSNVFLRNGARLYLDVGS
HPEYATPECDSVVDLVAHDRAGERILEGLLVDAEKRLHDEGIAGEIYLFKNNTDSAGNSY
GCHENYLVSRHGEFGRLADVLIPFLVTRQLICGAGKVLQTPRGAVYCLSQRAEHIWEGVS
SATTRSRPIINTRDEPHADAERYRRLHVIVGDSNMNEVTTLLKVGTADIVLRMIEAGVVM
RDLTLENPIRAIREVSHDITGRRKVRLSSGKEVSALDIQQEYLAKAIEFVERRGGDQTAK
RVVELWGRVLRAVETGDLEPVSREIDWVTKLRLIERYQRKHDLPLSHPRVAQMDLAYHDV
RRGRGLYALLERRGDVDRVATDPEIFEAKETPPQTTRARLRGEFIRHAQEKRRDFTVDWV
HLKLNDQAQRTVLCKDPFRAYDERVERLIASM
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggaacggcgaatcttcggtctggagaccgagtacggcgtcacctgcacctaccgtggg
cagcggcggctgtcccctgacgaggtcgcccggtacctcttccgccgggtggtgtcctgg
ggccgatcgagcaacgtctttctgcgcaacggcgcccgactctatctggatgtcggctcg
cacccggagtacgccaccccggagtgtgactcggtggtcgatctggtcgcccatgaccgg
gccggtgagcgcatcctggaagggctgctggtcgacgcggagaagcggctgcacgacgag
ggcatcgccggggagatctacctgttcaagaacaacaccgactcggccggcaactcgtac
ggctgccacgagaactatctggtgtcccggcacggtgagttcggccggctggccgacgta
ctgatcccgttcctggtcacccggcagttgatctgcggggcgggcaaggtgttgcagacg
ccgcgcggtgcggtgtactgcctctcccagcgggccgagcacatctgggaaggcgtctcg
tcggcgaccacccggagccgcccgatcatcaacactcgggacgagccgcacgcggacgcc
gaacgctatcgccgcctgcacgtcatcgtcggcgactccaacatgaacgaggtcaccacg
ctgctcaaggtcggtacggccgacatcgtgctgcggatgatcgaggccggggtggtgatg
cgcgacctcaccctggaaaacccgatccgggccatccgggaggtgtcgcacgacatcacc
ggccgccgtaaggtgcggttgtcctcgggcaaggaggtcagcgccctggatatccagcag
gaatacctcgccaaggcgatcgagttcgtggagcgtcgcggcggtgaccagaccgccaag
cgggtggtcgagttgtggggccgggtgctgcgggcggtggagaccggcgacctggaaccg
gtctcccgggagatcgactgggtgaccaagctccggctgatcgagcgttaccagcgcaaa
cacgacctgccgctgtcgcatccccgggtggcgcagatggatctcgcctaccacgacgtg
cgccggggccgagggctctacgccctgctggaacggcgcggtgacgtggaccgggtggcc
accgatccggagatcttcgaggccaaggagacgccgccgcagaccacccgggcccggctg
cgcggcgagttcatccggcacgcccaggagaaacggcgcgacttcaccgtcgactgggtg
cacctgaagctcaacgaccaggcacagcgcacggtgttgtgcaaggacccgttccgggcg
tacgacgagcgggtggagcggctcatcgccagcatgtga
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