KEGG   Massilia endophytica: LSQ66_17990
Entry
LSQ66_17990       CDS       T09693                                 
Name
(GenBank) ribonucleoside-diphosphate reductase subunit alpha
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
meny  Massilia endophytica
Pathway
meny00230  Purine metabolism
meny00240  Pyrimidine metabolism
meny01100  Metabolic pathways
meny01232  Nucleotide metabolism
Module
meny_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
meny_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:meny00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    LSQ66_17990
   00240 Pyrimidine metabolism
    LSQ66_17990
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:meny03400]
    LSQ66_17990
Enzymes [BR:meny01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     LSQ66_17990
DNA repair and recombination proteins [BR:meny03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    LSQ66_17990
SSDB
Motif
Pfam: Ribonuc_red_lgC ATP-cone Ribonuc_red_lgN
Other DBs
NCBI-ProteinID: UGQ45661
LinkDB
Position
complement(3924005..3926944)
AA seq 979 aa
MQSTQDMTTNPAAPLAGAAGAPSGGLTTPASALGDYRIIRRNGAVVAFEPSKIAVAMTKA
FLAVNGGQGAASARIRDLVEQLTNSVVNALVRRQPSGGTFHIEDVQDQVELALMRSGEHE
VARAYVLYRAKHMEERRLKKEAAGAGAIAEPQLHVTENGARRPLNMQEVRDLINAACSGL
EKHVDADAILAETVKNLYDGVPVEELHKSAILAARALMEKDPAYSQVTARILLHTIRKEV
FGKETPQAKAAAEYIEYFPKYIAKGIENELLNPELAKFDLAKLSKALVADRDLQFGYIGL
QTLYDRYFLHVRDIRIEMPQAFYMRVAMGLALNEDNREARAIEFYNLLSTFDFMSSTPTL
FNSGTLRSQLSSCYLTTVSDDLEGIYDAIKENALLAKFAGGLGNDWTPVRALGAHIKGTN
GKSQGVVPFLKVVNDTAVAVNQGGKRKGAVCAYLETWHMDIEEFLDLRKNTGDDRRRTHD
MNTANWIPDLFMKRVMEKGDWTLFSPSDCPDLHDKVGKAFEQAYLGYEAKAAAGEIRVHK
KIAALDLWRKMLSMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNTNDSEIA
VCNLGSVNLPAHMKEGKLDHVKLQKTIRTAMRMLDNVIDINYYAVDKARNANMRHRPVGL
GVMGFQDCLHMMRVPYASQEAVSFADTSMEAVCYYAYLASTELAEERGQYESYKGSLWDR
GILPQDSVKLLAEERGGYLEQDLSSAMDWTPVRERIKQFGMRNSNCVAIAPTATISNIIG
VSACIEPTFQNLYVKSNLSGEFTEINAYLVRDLKARGLWDEVMIADLKYYDGSLSKIDRA
PQDLRDIYATAFEVSPTWLVEAASRRQKWIDQAQSLNIYMAGASGKKLDETYKLAWLRGL
KTTYYLRTIAATHMEKSTTKTGALNAVPVDGGLSAAASAASSTAVPTAAAPTTVQEIQEG
AACYLRPGDPGFEECEACQ
NT seq 2940 nt   +upstreamnt  +downstreamnt
atgcaatctactcaagacatgaccaccaatccagcagcgcctctcgcaggcgcagcaggc
gcgccatccggcggcctgacgacgccggccagcgcgctgggcgactaccgcatcatccgc
cgtaacggcgcggtcgtcgcgttcgaaccgtcgaagatcgcggtcgccatgaccaaggcc
ttcctcgctgtgaatggtggccagggcgccgcgtccgcgcgcatccgcgacttggtggaa
cagctcacgaacagcgtggtcaacgcgctggtgcgccgccagccatccggcggcaccttc
cacatcgaagatgtgcaggaccaggtggaactggccctgatgcgctccggcgaacatgaa
gtggcgcgcgcttatgtgctgtaccgcgccaagcacatggaagaacgccgcctcaaaaaa
gaggccgcgggcgctggcgccatcgccgagccgcagctgcacgtcaccgagaacggcgcg
cgccgtccgctgaacatgcaggaagtgcgcgacctgatcaacgccgcctgttccggcctg
gaaaaacacgtcgatgccgacgccatcctggccgaaaccgtgaagaacctgtacgacggc
gtgccagtcgaagagctgcacaagtccgccatcctggctgcccgcgcgctgatggaaaag
gacccagcctactcccaggtcaccgcccgcatcctgctgcacaccatccgcaaggaagtc
ttcggcaaggagaccccgcaggccaaggccgcagccgagtacatcgagtacttccccaaa
tatatcgccaagggcatcgagaacgagctgctgaaccccgagctggccaagttcgacctg
gccaagctgtccaaggccctggtggccgaccgcgacctgcagttcggctacatcggcctg
caaaccctgtacgaccgctacttcctgcacgtgcgcgatatccgtatcgagatgccgcag
gccttctacatgcgcgtcgccatgggcctggccctgaacgaagacaaccgcgaagcgcgc
gccatcgagttctacaacctgctgtcgaccttcgacttcatgtcgtcgaccccgaccctg
ttcaactccggcacgctgcgctcccagctctcctcctgctacctgaccaccgtgtcggac
gacctggaaggcatctacgacgccatcaaggaaaacgccctgctggccaagttcgcgggc
ggcctgggtaacgactggaccccggtacgcgccctgggcgcccacatcaagggcaccaac
ggcaagtcgcaaggcgtggttcccttcctgaaagtggtgaacgacaccgccgtggcggtg
aaccagggcggcaagcgcaagggcgccgtctgcgcctacctggaaacctggcacatggac
atcgaggaattcctcgacctgcgcaagaacaccggcgatgaccgccgccgcacccacgac
atgaacaccgcgaactggattcccgacctgttcatgaagcgcgtgatggagaagggcgac
tggaccctgttctcgccatcggactgcccggacctgcacgacaaggtgggcaaggccttc
gagcaggcctacctgggctatgaagccaaggcggctgcgggcgagatccgcgtgcacaag
aagattgcggccctggacctgtggcgcaagatgctgtccatgctcttcgaaaccggccac
ccatggatcaccttcaaggatccttgcaacatccgttcgccgcagcagcacgtgggcgtg
gtgcacagctcgaacctgtgcaccgagatcaccctgaacaccaacgacagcgaaatcgcc
gtctgcaacctgggttccgtcaacctgccagcccacatgaaagagggcaagctggatcac
gtgaagctgcagaagaccatccgcaccgccatgcgcatgctggataacgtgatcgacatc
aactactacgccgtggacaaggcccgcaacgccaatatgcgccaccgtccggtgggcctg
ggcgtgatgggcttccaggactgcctgcacatgatgcgcgtgccttacgcctcccaggaa
gcggtgagcttcgccgacacctccatggaagcggtgtgctactacgcctacctggcctcg
accgagctggccgaagagcgcggccagtacgagtcctacaagggttccctgtgggatcgc
ggcatcctgccgcaggactccgtcaagctgctggccgaagagcgcggcggctacctggag
caggacctgtcctccgccatggactggactccggtgcgcgagcgcatcaagcagttcggc
atgcgcaactcgaactgcgtggcgatcgccccgaccgcgaccatttcgaacatcatcggc
gtgtcggcctgcatcgagcccaccttccagaacctgtacgtgaagtccaacctgtcgggc
gagttcaccgagatcaacgcctacctggtgcgcgacctgaaggcgcgcggcctgtgggac
gaggtcatgatcgccgacctgaaatactatgacggctccctgtcgaagatcgaccgcgct
ccccaggacctgcgcgacatctacgccacggccttcgaagtgtcgccgacctggctggtg
gaagcggcctcccgccgccagaagtggatcgaccaggcccagtcgctgaacatctacatg
gccggcgcctcgggcaagaagctggacgagacctacaagctggcctggctgcgcggcctg
aagaccacctactacctgcgcaccattgccgcgacgcacatggagaaatccaccaccaag
accggcgccctgaacgccgtgccggtggatggcggcctctccgccgctgcctcggcagcc
tcctcgacggccgtgccgaccgccgccgcgcccaccacggtgcaggagatccaggaaggc
gccgcctgctacctgcggccgggcgatcccggcttcgaagagtgcgaagcctgccagtaa

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