Macrococcus epidermidis: KFV12_08485
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Entry
KFV12_08485 CDS
T08412
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
mepi
Macrococcus epidermidis
Pathway
mepi03030
DNA replication
mepi03430
Mismatch repair
mepi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mepi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KFV12_08485 (holA)
03430 Mismatch repair
KFV12_08485 (holA)
03440 Homologous recombination
KFV12_08485 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mepi03032
]
KFV12_08485 (holA)
03400 DNA repair and recombination proteins [BR:
mepi03400
]
KFV12_08485 (holA)
Enzymes [BR:
mepi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KFV12_08485 (holA)
DNA replication proteins [BR:
mepi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KFV12_08485 (holA)
DNA repair and recombination proteins [BR:
mepi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KFV12_08485 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DisA-linker
KH_7
DNA_pol3_delt_C
Motif
Other DBs
NCBI-ProteinID:
UTH15356
LinkDB
All DBs
Position
complement(1592817..1593785)
Genome browser
AA seq
322 aa
AA seq
DB search
MSHIYLVYGSTKPLVEDKVDKIIHQYIDEQDDFNFSRYDLQETPFEVIAEDAMTLPFLSD
QKVIVINNSFIFTGEKLKIAHEINLDKVVDFLEKYEGPNIVIFKVLQDKLDERKKIVKRI
KKLHTIEKIEPLDENGMKQLIKKRFNEQFKDIKADALDEMIHLTGLNYSNVVKEMDKLVL
FIGDNPVITKKDVTEVVSRSLEQNVFLLTDYIAKDDKKRAVHLLKDLINMKEEPIKLLAL
ISSQYRLFYQVKILSQKGFSEAQISKQVKVHPYRVKLALRKVRTMELKQLLNIIKECADT
DYALKSSYLDNVLILELFILKI
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgagtcacatttatttagtctatgggagtacaaaaccattagttgaagataaagttgat
aaaattatccatcaatatatcgatgaacaggatgattttaattttagtcgatatgatcta
caggaaacaccatttgaagtaattgctgaagatgcgatgactttaccatttttgagtgat
cagaaagtgattgtaatcaataatagttttatttttacaggtgaaaaattaaaaattgca
catgaaattaatttagataaagtagtggattttctcgaaaagtatgagggacctaacatt
gtcatctttaaagtgctacaggataaattagatgagcgaaagaaaattgttaaacgcatc
aagaaattgcatacaattgagaaaatagaaccgctagatgaaaatgggatgaaacagctg
attaaaaagcgtttcaatgaacagtttaaagatattaaagcggatgcgttagacgagatg
atacatcttacaggactcaattacagtaatgttgtaaaagagatggacaaattagtatta
tttattggagataatccagtcattacgaagaaagatgtcactgaagtagtgagcagaagt
ctagagcaaaatgtctttttactcactgattatatcgctaaagatgacaagaaaagagcg
gttcatttattgaaagatttgattaatatgaaagaagaaccgattaaacttctggcattg
ataagtagtcagtatagattgttctatcaggtgaaaatattatcacaaaaaggatttagt
gaagcacagatttcaaaacaagtaaaagttcatccatatcgagtgaaactagcattacgt
aaagtaaggacaatggaattgaaacaactactaaatatcataaaagaatgtgctgatacg
gactatgctttaaaatccagttatctcgataacgtattaatactagaattgtttatctta
aaaatataa
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