Chelativorans sp. BNC1: Meso_1819
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Entry
Meso_1819 CDS
T00374
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
mes
Chelativorans sp. BNC1
Pathway
mes03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mes00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Meso_1819
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mes03021
]
Meso_1819
03400 DNA repair and recombination proteins [BR:
mes03400
]
Meso_1819
Enzymes [BR:
mes01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Meso_1819
Transcription machinery [BR:
mes03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Meso_1819
DNA repair and recombination proteins [BR:
mes03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Meso_1819
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_2
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
ABG63212
UniProt:
Q11HB3
LinkDB
All DBs
Position
complement(1952432..1956571)
Genome browser
AA seq
1379 aa
AA seq
DB search
MAQTQTFNGRRRVRKFFGKIPEVAEMPNLIEVQKASYDQFLMVEEPQGGRPDEGLQAVFK
SVFPISDFAGTAMLEFVKYEFEAPKFDTEECRQRDLTYAAPLKVTLRLIVFDIDEDTGSK
SIKDIKEQDVYMGDMPLMTDNGTFIINGTERVIVSQMHRSPGVFFDHDKGKSHSSGKLLF
AARVIPYRGSWLDIEFDAKDIVYARIDRRRKIPVTSLLMALGMDGEEILSTFYNKLTFIR
DGDNWRVPFSAERFRGMKATADIIDADTGEVVLEAGKKMTARMARQLADKGLKAIRATED
DLLGNYLAEDIVNMKTGEIFLEAGDEIDEKTLKILLETAGNEVKFLDIDHVNIGGYIRNT
LVADKNESRQDALFDIYRVMRPGEPPTLETAEAMFHSLFFDAERYDLSAVGRVKMNMRLE
LDCPDTVRVLRSEDMVAVVRTLVELRDGKGEIDDIDNLGNRRVRSVGELMENQYRLGLLR
MERAIKERMSSIEIDTVMPQDLINAKPAAAAVREFFGSSQLSQFMDQTNPLSEITHKRRL
SALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLATFARVNKYGFIETP
YRKIVDGKVTEEVVYLSAMEEAKHYVAQANATIDENGGFADEFVVCRHAGEVIMAPRENV
DLMDVSPKQLVSVAAALIPFLENDDANRALMGSNMQRQAVPLVRAEAPFVGTGMEPVVAR
DSGAAIAARRTGVVDQVDATRIVIRATEDVDASQSGVDIYRLQKFQRSNQNTCINQRPLV
RVGDLINKGDIIADGPSTDLGDLALGRNVLVAFMPWNGYNYEDSILLSERIVRDDIFTSI
HIEEFEVMARDTKLGPEEITRDIPNVSEEALKNLDEAGIVYIGAEVQPGDILVGKITPKG
ESPMTPEEKLLRAIFGEKASDVRDTSMRMPPGTYGTVVEVRVFNRHGVEKDERAMAIERE
EIERLAKDRDDEQSILDRNVYARLSEMLIGKEAIAGPKGFKKGGALTKELLGEYPRSQWW
QFAVEDEKLQSELEALRAQYDESKNALQQRFMDKVEKVQRGDEMPPGVMKMVKVFVAVKR
KMQPGDKMAGRHGNKGVVSRIVPIEDMPFLEDGTHVDIVLNPLGVPSRMNVGQILETHLG
WACAGMGRQIGELIDAYKEAGDIKPLRAKIESLIPDNDRNEPVRQYDDESVVRLSEQLRR
GVSIATPVFDGAHESDINEMLEEAGLNSSGQVTLYDGRTGEEFDRKVTVGYIYMLKLHHL
VDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDV
AGRTKVYEAIVRGDDTFEAGIPESFNVLVKEMRSLGLNVELENSSRFDTPPAQLPEAAE
NT seq
4140 nt
NT seq
+upstream
nt +downstream
nt
atggcccagacccagacattcaacggtcgcaggcgcgtacgcaagtttttcgggaagatt
ccggaagttgcggagatgccgaacctcatcgaggttcagaaagcatcctatgaccaattc
ctcatggtcgaggagccccagggcgggcgccccgacgagggattgcaggcagtcttcaag
tcggtgttcccgatctcggatttcgccggtacggcgatgctcgaattcgtgaaatacgag
ttcgaggccccgaaattcgacacggaagagtgccgtcagcgcgacctcacctatgcggcg
ccgctgaaggtgacgctgcgcctgatcgtgttcgatatcgatgaggatacgggctccaag
tccatcaaggacatcaaggagcaggacgtctatatgggcgacatgccgctcatgacggac
aacggcaccttcatcatcaacggcaccgagcgcgtgatcgtttcgcagatgcaccgttct
ccgggcgtcttcttcgatcacgacaagggcaagtcccattcgagcggcaagctgctcttc
gccgcccgcgtgatcccctatcgcggctcgtggctagacatcgagttcgacgccaaggac
atcgtctatgcgcgtatcgaccgccggcgcaagatcccggtgacgtcgctgctcatggcg
ctgggcatggatggcgaggaaatcctctccaccttctacaataagctcaccttcatccgt
gacggcgacaactggcgcgtgccgttttcggccgagcgcttccgcggcatgaaggccacc
gccgacatcattgacgccgacacgggcgaggtggtgctcgaggccggcaagaagatgacc
gcgcgcatggcgcgccagctcgctgacaaggggctgaaggcgatccgcgccaccgaggac
gacctgctcggcaactatctcgccgaggatatcgtcaatatgaagacgggcgagatcttc
ctcgaagccggcgacgagatcgacgagaagacgctgaagattctgctggagacggcgggc
aacgaggtgaaattcctcgacatcgaccacgtcaatatcggcggctatatccgcaacacg
ctggttgccgacaagaacgagagccgccaggacgcgctcttcgatatctaccgggtaatg
cgcccgggtgagccgccgacgctggagacggccgaggccatgttccactcgctgttcttc
gatgccgagcgctacgatctctcggccgtgggccgcgtgaaaatgaacatgcggcttgag
ctcgactgcccggacaccgtgcgcgtgctgcgcagcgaggatatggtggcggtcgtgagg
accctggtcgagctgcgcgacggcaagggcgagatcgacgacatcgacaatctcggcaac
cgccgcgtgcgctcggtgggcgagctgatggagaaccagtaccgcctgggtctcctgcgc
atggagcgcgccatcaaggagcgtatgtcgtcgatcgagatcgacacggtcatgccgcag
gacctgatcaacgcgaaaccggcggccgccgccgtacgcgagttcttcggctcctcgcag
ctctcgcagttcatggaccagacgaacccgctgtcggagatcacccacaagcgccgcctc
tcggcgcttggaccgggcggcctgacccgcgagcgcgccggcttcgaggtgcgcgacgtg
cacccgacgcattacggccgcatctgcccgatcgaaacgccggaaggtccgaatatcggc
ctgatcaattcgcttgccacctttgcccgcgtcaacaaatacggcttcatcgagacgccg
taccgtaagatcgtggacggcaaggtgacggaagaggtggtttatctctcggcgatggag
gaggccaagcactatgtggcccaggccaacgccacgattgacgagaatggcggctttgcc
gacgagttcgtggtctgccgtcacgccggcgaagtgatcatggcgccgcgcgagaacgtc
gacctgatggacgtctcgccgaagcagctcgtctcggtcgccgcggcgctcatcccgttc
ctcgagaatgacgacgccaaccgcgctctcatgggctccaacatgcagcgtcaggccgtg
cctctggtgcgggccgaggcgcccttcgtgggcactggcatggagccggtggtggcccgt
gattccggcgcggccatcgcggcccgcaggaccggcgtcgtcgaccaggtggacgcaacc
cgtatcgttatccgtgccacggaagacgtggatgcctcccagtcgggcgttgatatctac
cggctgcagaagttccagcgctccaaccagaacacctgcatcaaccagcgtccgctggtt
cgcgtgggcgatctgatcaacaagggcgacatcatcgccgacggtccgtcaacggacctg
ggcgatctggcgctcggccggaacgtgctcgtggccttcatgccgtggaacggctacaac
tacgaggactccatcctgctctccgagcgcatcgtgcgcgacgacatcttcacctcgatt
cacatcgaggagttcgaggtcatggcgcgcgacacgaagctcgggcctgaggagatcacg
cgcgacattccgaacgtgtcggaagaagcgctgaagaatctcgatgaggcgggcatcgtc
tatatcggcgcggaagtgcagccgggcgacatcctggtgggcaagatcacgccgaagggc
gaaagcccgatgacgccggaggagaagctgctgcgcgccatcttcggcgagaaggcgtcc
gacgtccgcgatacgtccatgcgcatgccgcccggcacctacgggacggtggtggaggtg
cgtgtcttcaaccgccacggggtggagaaggacgagcgcgccatggcgatcgagcgcgag
gagatcgagcggctcgccaaggaccgcgacgacgagcagtcgattctcgaccgcaacgtc
tatgcgcgcctttctgaaatgctgatcggcaaggaagcgatcgccgggcccaagggcttc
aagaagggcggtgcgctgacgaaggaacttctcggcgagtatccccgttcgcaatggtgg
cagttcgccgttgaggacgagaagctgcaaagcgagctcgaggcgcttcgcgcccagtac
gacgaatccaagaacgcgctgcagcagcgcttcatggacaaggtcgagaaggtgcagcgc
ggcgacgagatgcctcccggtgtcatgaagatggtcaaggtcttcgtggccgtaaagcgc
aagatgcagcccggagacaagatggccggccgccacggcaacaagggtgttgtgtccagg
atcgtgccgatcgaggacatgccgttcctggaggacggcacgcatgtggatatcgtgctc
aatccgctcggcgtgccctcgcgcatgaatgtggggcagatcctcgaaacgcatctgggc
tgggcgtgcgcgggcatgggccggcagatcggcgagctgatcgatgcctataaggaggca
ggcgacatcaagccgctccgggccaagatcgaatcgctgatcccggacaatgaccgcaac
gagcccgtccgccagtacgatgacgaaagtgtcgtgcggctgagtgagcagttgcgccgc
ggcgtctccatcgcaacgcccgttttcgacggcgcgcatgaatccgacatcaacgagatg
ctggaggaagcgggcctcaactcaagcgggcaggtgacgctctatgacgggcgcaccggc
gaggagttcgaccgcaaagtgactgtgggctacatttatatgctcaagcttcaccacctg
gtggatgacaagatccacgcgcgttccatcggcccgtactcgctcgtcacccagcagccg
ctgggcggcaaggcgcagttcggcggccagcgcttcggcgagatggaggtgtgggcgctc
gaagcttacggcgctgcctacacgctgcaggagatgctcacggtcaagtccgacgacgtg
gccggccgaaccaaggtctacgaggccattgtacgcggcgacgatacgttcgaagcgggc
attcccgaaagcttcaacgttctcgtcaaggagatgcgctcgctggggctcaatgtggag
ctggagaattcctcgcgcttcgacacgccgccggcgcagctgccggaagccgccgaatag
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