Methanocaldococcus lauensis SG1: MLASG1_0065
Help
Entry
MLASG1_0065 CDS
T07808
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mesa
Methanocaldococcus lauensis SG1
Pathway
mesa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mesa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MLASG1_0065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mesa03019
]
MLASG1_0065
03009 Ribosome biogenesis [BR:
mesa03009
]
MLASG1_0065
Enzymes [BR:
mesa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MLASG1_0065
Messenger RNA biogenesis [BR:
mesa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MLASG1_0065
Ribosome biogenesis [BR:
mesa03009
]
Prokaryotic type
rRNA helicases
MLASG1_0065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Acid_PPase
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CAB3287182
LinkDB
All DBs
Position
I:55780..56919
Genome browser
AA seq
379 aa
AA seq
DB search
MNFNDLNLSENTLNAIKNKGFNKPTDIQTKVIPLFLNENCNIVAQARTGSGKTASFGIPL
VDLIDENSKLSAIILTPTRELAIQVADEIESLKGNKNLKIAKIYGGKPIYPQIKDLKNAN
IVVGTPGRILDHINRGTINLKNVKYFILDEADEMLDMGFIEDVEKILNSCNNKNKRILLF
SATMPEKILNLCKKYMKSYEFVKVKTTTNIDQSFIETKENERFKTLCKLLKNNEFYGLVF
CNTKKDTKELKNKLRDIGFKAEAIHGDLKQPRREKIIRLFKQKRIKILIATDVMCRGIDV
NDLKCVINYHLPQNPRAYMHRIGRTGRVDKKGTSITIITKREYRKLKYIEKTYKIKIKRH
KLNYSKQIKKVENKNNLHK
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgaattttaacgacttaaacttatcagaaaataccttaaatgctattaaaaataaaggc
tttaacaagccaactgatattcagacaaaagttattcctttatttttaaatgaaaattgt
aatattgtggcacaagcaagaactggtagtgggaaaactgcctcatttggaataccatta
gttgatcttatagacgaaaactctaaattatctgcaattattttaacacctacgagagaa
ttggcaattcaagttgcagatgaaatagaatcactaaaaggaaacaaaaatttaaaaatt
gctaaaatttatggtggaaagccaatatatccacaaattaaagatttaaaaaacgctaac
atagttgtaggaacaccgggaagaattttagaccacataaatagaggcaccataaatttg
aagaatgttaaatacttcatattagatgaagctgacgaaatgctggatatgggatttatt
gaagatgttgaaaaaattttaaattcatgcaataataaaaataaaagaatccttttgttt
tcagcaacgatgccagaaaagatattaaatctctgtaaaaaatatatgaaaagctatgaa
tttgtaaaggttaaaactactacaaatattgatcagagttttattgaaactaaggaaaat
gaaagatttaaaacattatgtaaattattaaaaaataatgaattttatgggttggttttt
tgcaatactaaaaaagatactaaagagttaaagaataaattgagagatattggttttaaa
gcagaagcaatacatggagatttaaaacaaccaagaagagaaaagataataagattgttt
aaacaaaaaagaattaaaattttaatagctacagatgtaatgtgcagaggtattgatgtt
aatgatttaaaatgtgtaattaactatcatctacctcaaaacccaagagcatatatgcat
agaattggaagaactggaagagttgataaaaagggaacatcaataactattattactaaa
agggagtataggaagttaaaatatattgaaaaaacatataaaataaagattaaaagacat
aaactaaactattctaaacaaataaaaaaagtagagaataaaaacaacctacataaataa
DBGET
integrated database retrieval system
