Manihot esculenta (cassava): 110600341
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Entry
110600341 CDS
T05761
Name
(RefSeq) transcription factor SPEECHLESS
KO
K20558
transcription factor SPEECHLESS
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
110600341
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mesc03000
]
110600341
Transcription factors [BR:
mesc03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
110600341
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GFIT
Motif
Pfam:
HLH
bHLH-TF_ACT-like_plant
Motif
Other DBs
NCBI-GeneID:
110600341
NCBI-ProteinID:
XP_021592869
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Position
14:complement(1915678..1918291)
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AA seq
333 aa
AA seq
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MSDSFSDFLDRPEFCDANLHGDDLFAIFESLDSVTEFPPVAPSDEVVVSSKESEEKTRLL
SQKSTCSSALLESETEIETSPKSKRQKTTATSPEELVNPDGQQKISHITVERNRRKQMNE
HLSALRSLMPCFYVKRGDQASIIGGVVDYINELQQVLQSLEAKKQRKVYSEVLSPRVVSS
PRPSPLSPRKPPLSPRLNLPISPRTPQPGSPYRPRLQQGYLSPTMASSLEPSPTSSSSSI
NDNNELVANSKSAIAVVEVKFSGPNVLLKTVSPMIPGQAVKIVSALEDLSLEILQVSMNT
VDETMLNSFTIKIGIECQLSAEELAQQIQQTFC
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacagtttctctgattttttggatagacctgaattttgcgacgctaacttgcac
ggagacgatctcttcgctatttttgagagcttagatagcgtaacagagttccctccagtt
gcaccatcggacgaagttgttgtgagctcaaaagaaagcgaagaaaagacgaggctgtta
tcccagaagtctacatgttctagtgctctgctagaatctgaaactgagatcgaaacttct
ccaaagagcaagagacaaaagaccacagcaacttctccagaggaactggtaaacccagat
ggccagcaaaagatatctcatattacagtggagcgcaaccggagaaaacaaatgaacgag
cacttgtctgctttgagatcgctcatgccttgcttctatgtcaagagaggagaccaagca
tcaataatcggaggtgttgttgattacatcaatgagttgcagcaagttctacaatccctt
gaggccaagaagcaaagaaaagtttacagtgaagtactcagccccagggtagtgtcaagt
ccaagaccctcaccacttagccctagaaaaccaccgctgagtcctagacttaatttacct
ataagcccaagaaccccacaaccaggtagcccttacagaccaaggttacagcaaggctac
ctctcccccaccatggccagttctctcgaaccatccccaacttcttcttcttcctccata
aatgacaacaatgaactggttgcaaattccaagtctgccattgccgttgtggaggttaag
ttctctggcccaaatgttctattgaaaacagtatctcccatgattcccggtcaagctgta
aagattgtttctgccctggaggacctctcgctcgagatcctacaagtgagcatgaacact
gtcgatgagaccatgcttaactccttcactatcaagattggaattgaatgccaacttagt
gcagaggagctcgctcagcaaatccagcaaacattctgctaa
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