Manihot esculenta (cassava): 110604415
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Entry
110604415 CDS
T05761
Name
(RefSeq) polyubiquitin
KO
K08770
ubiquitin C
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110604415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mesc04121
]
110604415
Ubiquitin system [BR:
mesc04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
110604415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
TBK1_ULD
Rad60-SLD_2
Dsc3_N
DUF2604
Ubiquitin_5
UBL_UBAC1
Motif
Other DBs
NCBI-GeneID:
110604415
NCBI-ProteinID:
XP_021598264
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Position
17:complement(21671801..21673138)
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AA seq
305 aa
AA seq
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MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR
LRGGI
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcttcgttaagaccctcaccggaaaaaccatcactctcgaggtcgagagcagc
gacaccatcgacaacgtcaaagccaaaatccaggataaagaaggtatcccaccagaccag
cagcgtctcatctttgccggaaagcaacttgaggacggccgtaccttggctgattacaac
atccaaaaggagtcgactctccacctcgtcctccgtctccgtggtggcatgcagatcttt
gtgaaaaccttgaccggaaagactattacccttgaggtcgagagcagcgacaccattgac
aacgtcaaggctaagattcaggacaaggaaggaattcccccagatcagcaaaggcttatc
tttgccggaaaacagctggaggacggccgcacattagccgattataacattcagaaggaa
tctacccttcacctcgtgcttcgtctgcgtggagggatgcagattttcgtgaagaccttg
actggaaaaactattaccctggaggtggagagcagcgacaccattgataatgttaaggca
aaaattcaggacaaggaaggtatcccaccagatcagcagaggctgatcttcgccgggaag
cagctggaagatggccggactttggctgattacaacattcagaaggaatccactttgcac
ctagtgctcaggcttcggggaggaatgcagatctttgtcaagaccttgactgggaagacc
atcactttggaggtggagagcagcgacacaatcgataatgtgaaggcgaagattcaggat
aaggagggtattcccccagatcagcagaggcttatctttgctgggaagcagctggaggat
ggaaggactcttgctgattataacatccagaaagagtcgacccttcaccttgtcctgcgt
ctgcgtggtggaatctga
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