Manihot esculenta (cassava): 110609680
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Entry
110609680 CDS
T05761
Name
(RefSeq) crooked neck-like protein 1
KO
K12869
crooked neck
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110609680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mesc03041
]
110609680
03036 Chromosome and associated proteins [BR:
mesc03036
]
110609680
Spliceosome [BR:
mesc03041
]
Complex B
Other components
Prp19-related factors
110609680
Complex C
110609680
Chromosome and associated proteins [BR:
mesc03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
110609680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
HAT_PRP39_N
TPR_14
HAT
Suf
TPR_19
TPR_16
TPR_CcmH_CycH
TPR_2
HAT_Syf1_M
TPR_17
Mad3_BUB1_I
RAB3GAP2_C
ARM_TT21
DUF2659
U3_assoc_6
Motif
Other DBs
NCBI-GeneID:
110609680
NCBI-ProteinID:
XP_021605138
LinkDB
All DBs
Position
2:complement(1278906..1284012)
Genome browser
AA seq
696 aa
AA seq
DB search
MSSAKDADPSLGYLTRKDTEVKLPRPTRVKNKTPAPIQITAEQILREARERQEAEIRPPK
QKITDSTELADYRLRKRKEFEDLIRRVRWNISVWIKYAQWEESQKDFNRARSVWERALEV
DYRNHTLWLKYAEVEMKNKFINHARNVWDRAVTLLPRVDQLWYKYIHMEEMLGNVAGARQ
IFERWMGWMPDQQGWLSYIKFELRYNEIERARGIFERFVQCHPKVSAWIRYAKFEMKNGE
VARARNVYERAVEKLADDEEAEQLFVAFAEFEERCKESERARCIYKFALDHIPKGRAEDL
YRKFVAFEKQYGDKEGIEDAIVGKRRFQYEDEVRKNPLNYDSWFDYIRLEESVGNKERIR
EVYERAIANVPPAEEKRYWQRYIYLWINYALYEELDAEDIERTRDVYRECMNLIPHKKFS
FAKIWLLAAQFEIRQLNLKSARQILGNAIGKAPKDKIFKKYIEIELQLGNIDRCRKLYEK
YLDWSPENCYAWSKYAELERSLSETERARSIFELAIAQPALDMPELLWKAYIDFEISEGE
YERTRQLYERLLDRTKHLKVWISYAKFEAAAMEEIVEGADSLEEQKKKCIQNARRVFEKA
INYFRTSAPELKEERAMLLEEWLNMESSFGELGDVGLVQPKLPKKLKKRRPIASEDGLAG
LEEYIEYIFPEETQAPNLKILEAAYRWKKQKLSTED
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcagcgaaggatgccgatccttctctgggttacctgacccggaaagataccgaa
gtgaagcttcctcggccaacgcgggtgaaaaacaaaacaccggcccccattcagattacc
gcagagcagatactgcgcgaggcaagggaacgtcaggaagctgaaatccggcctcccaag
cagaagatcacagactcaactgagctcgctgactatcgacttcgcaaaaggaaggagttt
gaagacctaatcagacgggttcgatggaatattagtgtatggattaaatacgcacagtgg
gaggagtcacaaaaagacttcaatagagctcgttcggtttgggaacgagcactggaggtt
gattaccggaatcacacgctatggctcaaatatgcggaggtggagatgaagaacaagttc
ataaatcatgccaggaatgtgtgggatcgtgctgttacgcttttgccccgtgtggatcag
ttgtggtacaagtacattcacatggaggagatgcttggaaatgtggccggggctagacag
atctttgaaagatggatgggttggatgcctgaccaacaagggtggctttcttatatcaaa
tttgaactgaggtacaatgaaattgaacgtgcaagaggaatttttgaacgttttgttcag
tgtcacccgaaggtcagtgcatggattcggtatgctaagtttgagatgaagaatggggaa
gttgcgagggctaggaatgtatatgaaagggcggttgagaaattggctgatgatgaggag
gcagagcagttgtttgtggcttttgctgagtttgaggagcggtgcaaagagtcagagcgt
gctcggtgtatttataagtttgcactggaccatataccgaaagggagggcggaggatttg
tataggaagtttgttgcgtttgagaagcagtacggggacaaggaaggaattgaagatgca
atagtggggaagaggaggtttcagtatgaggatgaagtgaggaagaacccattgaattat
gattcgtggtttgattatattaggttggaggagagcgttgggaataaggagaggattagg
gaagtttatgagcgtgcaattgcaaatgtccctccagctgaggagaagagatattggcag
agatacatatacctgtggattaattatgctctctacgaagaacttgacgctgaagatatt
gagagaacacgggatgtttacagggaatgcatgaacctaattcctcataagaagttttca
tttgcaaaaatatggcttttagctgcccaatttgaaattcgacaattgaatctcaagagt
gctcgacaaattttaggcaatgccattggtaaagctcccaaagataagattttcaagaaa
tatattgagatagagctgcaacttggtaatattgatcgctgtcgaaagctttatgagaaa
tatttagattggtcacctgaaaattgttatgcttggagcaaatacgcggagctggaaaga
tctctgtctgaaactgaacgggcacgatcaatttttgagcttgcaatagcacagccagcc
ttggacatgccagagttgttatggaaggcatatattgattttgaaatatccgaaggtgaa
tacgagagaacaagacagctttatgagagactattggaccgaacaaagcatttaaaggtt
tggattagttatgccaaatttgaggcagctgccatggaagagattgttgagggtgcagat
tcattggaagaacagaagaaaaagtgtattcaaaatgcaagaagggtatttgagaaagcc
attaactatttcagaacgtcagcacctgaattgaaggaggaacgtgctatgcttttggaa
gaatggttgaacatggagagtagttttggggagttaggtgatgttggcttagtccagcct
aagctgcctaagaagctcaaaaagaggaggccaattgcctcagaagatggtctggctggg
ttggaggaatatatagagtacatattcccagaagaaactcaggccccaaatctaaaaatc
ttggaagctgcatatcgctggaagaagcaaaagctgtctaccgaggattaa
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