Manihot esculenta (cassava): 110610979
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Entry
110610979 CDS
T05761
Name
(RefSeq) importin-4 isoform X1
KO
K20221
importin-4
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110610979
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mesc03009
]
110610979
Ribosome biogenesis [BR:
mesc03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
110610979
Pre-60S particles
110610979
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_IPO5
HEAT_EZ
HEAT_GCN1
HEAT
TPR_IMB1
TOR1L1_N
HEAT_2
HEAT_EF3_N
IBN_N
MMS19_C
HEAT_MROH2B_C
HEAT_ECM29
Vac14_Fab1_bd
mTOR_dom
Cnd1
HEAT_GCN1_C
HEAT_GCN1_C_2
IFRD
Htt_N-HEAT_1
ParcG
Importin_rep_6
CLASP_N
PPP2R1A-like_HEAT
HEAT_Maestro
TPR_CAND1
Dopey_N
DUF4042
ARM_TBCD_2nd
Cnd3
TPR_TTI1_N
Motif
Other DBs
NCBI-GeneID:
110610979
NCBI-ProteinID:
XP_021606755
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All DBs
Position
3:15595834..15606202
Genome browser
AA seq
1056 aa
AA seq
DB search
MAQSLELLLIQFLMPDNDARRQAEEQIKRLAKDPQVVPALVQHLRTAKTPNVRQLAAVLL
RKKITGHWAKLSPQLKQVVKNSLIESITLEHSPPVRRASANVVSIIAKYAVPAGEWPDLL
PFLFQCSQSAQEDHREVALILFSSLTETIGSAFQPHFTDLQALLLKCLQDETSNRVRVAA
LKAVGSFLEFTNDGAEVVKFRQFIPSILNVARQCLASGEEDVAVIAFEIFDELIESPAPL
LGDSVKSIVQFSLEVCSSQNLESNTRHQAIQIISWLAKYKSTSLKKYKLVIPILQVMCPL
LTESNDADEDDDLAPDRAAAEVIDTMALNLSKHVFPPVFEFASFNSQNANPKYREASVTA
LGVISEGCLDLMKDKIEPVLHIVLGALRDPEQMVRGAASFALGQFAEHLQPEIVSHYESV
LPCILNALEDISDEVKEKSYYALAAYCENMGEEILPFLDPLMVKLLGALQNSPRNLQETC
MSAIGSVASAAEQAFIPYAERVLELMKSFMVLTNDEDLLSRARATELVGIVAMSVGRTRM
ETILPPFMEAAISGFSLEFSELREYTHGFFSNVAEILDESFAQYLPHVVPLAFLSCNLDD
GSAVDIDESDDENINGFGGVSSDDEAHDEPRVRNISIRTGVLDEKAAATQALGLFALHTK
SFYAPYFEESLKILVRHSGYFHEDVRLQAIIALKYILTAAYAIFQSHNDGPAKAREVLDN
VMRIYIKTMTDDDDKEVVAQACMSVADIFKDYGFVAVEPYMSQLIDATLVLLREESACQQ
SDNDSDDDDADTEHDEVLMDAVSDLLPAFAKSMGAHFAPIFVNLFEPLMKFAKSSRPPQD
RTMVVACLAEVAQNMGPPIASYVDRIMPLVLKELASSEATNRRNAAFCVGELCKNGGEST
LKVFPCINTRYYGDILRGLYPLFGESELDDAVRDNAAGAVARMIMVHPQSIPLNQVLPAF
LKVLPLKEDHEESMAVYSCVSTLVLSSNPQILALVPELVNLFAQVAVSPVETPEVKAQVG
RAFSHLISLYGHQMQPLLSNLSPAHANALAAFAPKC
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atggctcaatctctggaattgttgcttattcaattcttgatgcctgacaacgacgctcgg
aggcaggctgaggagcagattaagaggttggccaaggatccccaggtggttcccgccctt
gtccagcacctccgcaccgccaagacccccaacgtacgccagctagcggctgttcttctc
cgtaagaagatcaccggccactgggccaagctctcccctcaactcaagcaggttgtcaag
aactccctcattgagagcatcactctggagcacagtccaccagtgaggcgagcaagtgca
aacgttgtgagtatcattgcaaaatatgctgttccagcaggagagtggccggatttactt
ccttttctgttccaatgtagtcaaagtgcacaagaagaccatagagaagtggcattgatc
ctttttagctctttaactgaaacaatcggaagtgcatttcaacctcatttcacagatttg
caagctcttttactcaagtgcctgcaagatgagactagcaaccgtgttagagtcgctgct
cttaaggcagtaggttcttttctagaatttacaaatgatggggctgaagtggtaaagttt
cggcagttcattccaagcattttgaatgtagcaagacaatgccttgcctccggtgaggaa
gatgttgcagtaattgcttttgaaatttttgatgagcttatagaatctccggctccactt
cttggagactcggttaaatccattgtgcagttctcccttgaagtttgctcaagtcaaaat
ttggaatccaatacacgtcatcaggctattcaaataatttcatggctggccaagtacaaa
tccacttccctgaaaaagtataagttggtcatccccattctgcaagtgatgtgccccttg
cttacagaatcaaacgatgctgatgaagatgatgatcttgctccagatcgagctgctgca
gaagttattgacactatggctttgaacctttcaaaacatgtctttccccctgtttttgag
tttgcttcatttaatagtcagaatgcaaatcccaagtatcgggaagcttcagttacagct
ctaggtgttatttcagagggttgtttggacttgatgaaggataagatagaacctgttctt
catattgtgttaggggcactgagggatccagaacaaatggttagaggagccgcgtcattt
gctttgggccaatttgctgagcatttacagcctgaaattgtgtcacactatgaaagtgtt
cttccctgcattttaaatgcccttgaagacatatctgatgaagtaaaggagaagtcgtac
tatgctttagcagcatactgtgagaacatgggtgaagaaattcttcctttccttgatcct
ttgatggtgaagctacttggggctcttcaaaatagcccccgtaatctgcaggaaacatgc
atgtctgcaattggttcagttgcctcagctgcagagcaagctttcataccatatgctgaa
agggttctggagttgatgaagtctttcatggtactcacaaatgatgaggatcttctatca
cgagcaagggccactgagcttgttggaatagttgctatgtctgttggaagaacaaggatg
gaaacaatattacccccttttatggaagctgcaatttctggtttcagcttggagttcagt
gagcttcgggagtatactcatggattctttagcaatgtagctgaaattttggatgagagc
tttgcacagtatcttcctcatgttgtacccttggcattcttgtcctgcaatcttgatgat
ggctcggctgtggatattgatgaatctgatgatgaaaatattaatggctttggtggagtt
tcatctgatgatgaagcccatgatgagccaagagtaagaaatatcagtataagaacagga
gtattggatgaaaaggcagctgcaactcaagcacttggcttatttgcactgcacacgaag
agtttttatgcaccctattttgaggagtcattaaagattttggtaagacattcaggatat
tttcatgaagatgttcggcttcaggcaatcattgctctaaaatacattttgacagcagca
tatgcaatcttccaaagtcataatgatggaccagcaaaggcacgagaagttcttgataat
gtgatgcgtatttatatcaagactatgactgatgatgatgacaaagaagttgttgctcaa
gcttgcatgagtgtagcagacatttttaaagattatggtttcgtagctgttgaaccttat
atgtctcagcttattgatgcaaccttggtattgcttagagaagaatcagcttgtcagcaa
tcagataatgatagtgacgatgatgatgctgatactgaacatgatgaagtccttatggat
gcagtctctgaccttcttcctgcatttgcaaaatctatgggtgcacattttgctccgatc
tttgtcaacctatttgaacctctgatgaaatttgcaaaatcttcacgtcctccacaagat
cggactatggtggttgcttgccttgctgaagttgctcaaaatatgggtcctccaatagcc
agctatgttgataggataatgcccttggtactgaaagaactagcatcatcagaggccacc
aatagaaggaatgctgcattttgtgttggggagttgtgcaaaaatggaggcgaatcaact
ttgaaagtttttccttgcatcaataccagatattatggtgatattttacgtggactttac
ccattatttggggaatctgaactggatgatgctgtcagggataacgcagctggtgcagtg
gcaaggatgataatggtgcatccccagtccatcccattgaatcaggttcttcctgctttc
ttaaaagttcttccattaaaagaagatcatgaagagtcgatggctgtatacagttgcgtc
tctactcttgttttgtcatctaatccacagatccttgcacttgtccctgaattggttaat
ctttttgctcaagttgcggtgtctccagtcgaaaccccagaagttaaggcgcaagtagga
agagcattttctcatctgatttcactgtatggccatcaaatgcagcctctattgagcaac
ctttcaccagcacatgcaaatgctctagctgcatttgcccccaaatgttga
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