Manihot esculenta (cassava): 110615709
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Entry
110615709 CDS
T05761
Name
(RefSeq) NPL4-like protein 1
KO
K14015
nuclear protein localization protein 4
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
110615709
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mesc03009
]
110615709
Ribosome biogenesis [BR:
mesc03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
110615709
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NPL4
UN_NPL4
OTU1_UBXL
DWNN
ubiquitin
TehB
Motif
Other DBs
NCBI-GeneID:
110615709
NCBI-ProteinID:
XP_021613441
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Position
5:5747867..5751496
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AA seq
410 aa
AA seq
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MMLRIRSRDGLERVSVDNPNITVSQLKTLIQNQLQIPIHKQTLSTNQNLLLAKSPSDLLK
FTDMCDPNIPLSSLNIAHGSIVFLAYEGERTIAGPAVHPAGSFGRKMTMDDLIAKQMRIT
RQETPHCESVSFDRECANAFQQYVNETLAFAVKRGGFMYGTVSEEGKVEVNFIYEPPQQG
TEEILMLLRDPQEEKLVDAIAAGLGMRRVGFIFTQTITQDKKDYTLSNREVLQAAELHAE
SELKEWVTAVVKLEVNEDGGADVHFEAFQMSDTCVKLFKEKWFETEIGEDMDPKLSKMNK
DVVVGGKDVREVDNDFFLVVVKILDHVGTLSSSFPIENRISQVTVRALKNHLDRTKNLPF
VKRISDFHLLLFVARFLDLSDVPALAECVQTQTTVPEGYQLIIVSMANTS
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgatgcttagaatccgtagcagagacggcctcgagcgcgtctccgtcgacaaccccaac
ataactgtttcccagctcaaaaccctaattcaaaaccagcttcaaataccaatccataag
caaaccctttctactaaccaaaacttactcttggcgaaatcgccttccgatctcctcaaa
ttcaccgacatgtgtgaccccaatatccccctctcttccctcaacattgcccatggctct
attgtcttcttggcctacgagggcgagagaaccatagcgggacccgccgttcatcccgcg
ggatcattcggccgcaagatgactatggacgacctaatcgctaaacaaatgcgaattacc
aggcaagaaactcctcattgcgagtcggtgtctttcgatcgggaatgtgccaatgcgttc
cagcagtatgttaacgagacgcttgcttttgccgtgaaaaggggtgggtttatgtatggg
acggtgtcggaggaagggaaagtggaagtgaatttcatatatgaaccgccccagcagggc
actgaggaaattctgatgcttttgagagatccccaggaagagaaattggtggatgcgatc
gcagcgggtttagggatgaggagagtgggttttatatttacacagacgattacgcaggac
aagaaagattacactttgtccaacagagaggttctgcaggctgctgaacttcatgcagag
agtgagttgaaggagtgggtgacggcagtggtgaaactggaagtgaatgaagatggtgga
gccgatgtgcattttgaggcgtttcaaatgagtgatacgtgtgttaaactgttcaaggaa
aagtggttcgagacagaaattggggaggatatggatcctaagttgtctaaaatgaataag
gatgttgttgttggaggaaaggatgttagggaggtcgataatgattttttcttggtcgta
gttaagattctcgatcacgtgggtactctttcttcatcctttcccattgagaacagaatc
agccaagtgacagtgagagcactgaagaatcatctggaccgtacaaagaatcttccattc
gtcaaaagaatttctgattttcatctgctgctctttgtggccaggtttctagatctcagt
gatgttcctgcattggcagagtgtgtgcaaacacagacaacagtcccagaaggttaccag
ctcataattgtttccatggcgaatacttcttga
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