Manihot esculenta (cassava): 110622914
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Entry
110622914 CDS
T05761
Name
(RefSeq) F-box protein At3g58530 isoform X1
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mesc04121
]
110622914
Ubiquitin system [BR:
mesc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
110622914
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DUF7885
LRR_6
LRR_4
LRR_At5g56370
LRR_NXF1-5
LRR_EndoS
LRR_FBXL18
Motif
Other DBs
NCBI-GeneID:
110622914
NCBI-ProteinID:
XP_021623329
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Position
9:complement(7289100..7301095)
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AA seq
374 aa
AA seq
DB search
METKKEEDDLTWSRETIPRVMKIVSTKLPQRDLVSLLLVSPWLHRTLISYPSLWLVLDFR
EMNKAGDRLTAALSLSRYQHVKQINLEFAQDIEDRHLEVLQNKFINSLQNLESLNLNGCQ
KISDKGIEAITSACPKLKVFSIYWNVRVTDLGIKHLVKNCKHVVDLNLSGCKNISDESLQ
LVADNYQDLESLNLTRCIKLTDGGLQQILVKCSSIHSLNLYAISIFTDKAYKKISNLAHL
QFLDLCGAQNLSDEGLSYIAKCKNLVSLNLTWCVQVTDVGVISIAEGCTSLEFLSLFGIV
GVTDKCLEVLSRFCSTTITTLDVNGCIGIKLRENPSDPPWPQKEGKKRVSFFFTLTTLPR
SVCITRSMGKILIV
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atggaaacaaagaaggaagaagacgacctaacatggagcagagaaacaattccaagagta
atgaagatagtcagcacgaaactccctcaaagagacctagtttctcttctgcttgttagc
ccttggctccaccgcactcttatctcttacccctctctctggctggttcttgattttcgt
gagatgaataaagctggagatagacttacagcggctctttcactgtcaagataccagcat
gtgaagcagattaaccttgaatttgcacaagatattgaagacagacatcttgaagtcctt
caaaacaagtttatcaattctcttcaaaacttggagtctttaaacttgaatggctgccag
aagatctctgacaagggaatagaagctataaccagtgcttgtccaaaactgaaggtcttc
tctatttattggaatgtgagggtgacagatcttggtataaagcatttggtgaagaattgc
aaacatgtagttgatttgaacttgagtggatgtaagaatatatcagacgaaagtttgcaa
ttagttgctgacaactatcaagacttagagtcattgaatctcactaggtgcatcaagcta
acagatggcggtttgcaacaaatattggtcaagtgttcctctatccacagtttaaatctt
tatgccatttccatcttcactgacaaagcttacaagaaaatatcaaatctagcccatcta
caatttttagatttatgtggtgcccagaatctatctgatgagggactttcttatatagcc
aaatgcaagaatcttgtctcactaaatttgacgtggtgcgttcaagtcactgatgtgggg
gttatatcaattgctgaaggttgcacctctcttgagtttctcagcttgtttggaatagtt
ggtgtgactgacaagtgcctggaggtcctttcaaggttctgctcaactacaatcacaacc
cttgatgtaaatggatgcattggcataaagctcagggaaaaccccagtgaccccccttgg
ccccaaaaagaggggaaaaaaagagtttccttctttttcactttgactacactaccaaga
agtgtatgcattacaaggtcaatgggaaaaatcctgattgtttaa
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