KEGG   Manihot esculenta (cassava): 110626747
Entry
110626747         CDS       T05761                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 9
  KO
K03133  transcription initiation factor TFIID subunit 9B
Organism
mesc  Manihot esculenta (cassava)
Pathway
mesc03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:mesc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    110626747
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mesc03021]
    110626747
   03036 Chromosome and associated proteins [BR:mesc03036]
    110626747
Transcription machinery [BR:mesc03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     110626747
   Coactivators
    SAGA/TFTC/STAGA complex
     110626747
Chromosome and associated proteins [BR:mesc03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     110626747
    STAGA complex
     110626747
    TFTC complex
     110626747
    SAGA complex
     110626747
    SLIK complex
     110626747
SSDB
Motif
Pfam: TFIID-31kDa CENP-S Bromo_TP CENP-T_C LonB_AAA-LID Histone TIP49_C
Other DBs
NCBI-GeneID: 110626747
NCBI-ProteinID: XP_021628508
LinkDB
Position
11:complement(2145108..2147086)
AA seq 176 aa
MAEGEEDLPRDAKIVKSLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKS
AIDCDDVKLAIQSKVNFSFSQPPPREVLLELARKRNKIPLPKSITGPGIPLPPEQDTLIS
PNYQLAIPKKQPAQAVEETEEDEESADLNPSQEPKADVPQHNTPQRVSFPLTKRPK
NT seq 531 nt   +upstreamnt  +downstreamnt
atggcagagggagaagaggacttgccaagagatgcaaagattgtcaaatcgcttctgaaa
tcaatgggcgtggaggattatgaacctcgtgttatacaccagtttctagagctttggtat
cgttatgttgttgatgtgttgacagatgcacaagtttactctgagcatgctggcaaatct
gcaattgactgtgatgatgtcaagcttgctattcagtcaaaagtaaatttcagcttctcg
caaccaccaccaagagaggttttattggaattggctagaaaaaggaacaaaatcccattg
ccaaagtcaataactggacctggtatcccactcccaccagagcaggacaccttgattagc
ccgaattaccaacttgctatcccaaagaagcagcctgcccaggcagtagaagaaacggag
gaggatgaagaaagcgctgatctcaatccatcacaagagccaaaggctgatgtcccacaa
cataatactcctcaaagagtatcctttccccttaccaaacgtcccaagtaa

DBGET integrated database retrieval system