Manihot esculenta (cassava): 122722532
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Entry
122722532 CDS
T05761
Name
(RefSeq) general transcription and DNA repair factor IIH subunit TFB5
KO
K10845
TFIIH basal transcription factor complex TTD-A subunit
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc03022
Basal transcription factors
mesc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122722532
09124 Replication and repair
03420 Nucleotide excision repair
122722532
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mesc03021
]
122722532
03400 DNA repair and recombination proteins [BR:
mesc03400
]
122722532
Transcription machinery [BR:
mesc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
122722532
DNA repair and recombination proteins [BR:
mesc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
122722532
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb5
Motif
Other DBs
NCBI-GeneID:
122722532
NCBI-ProteinID:
XP_043809541
LinkDB
All DBs
Position
2:complement(2681740..2683279)
Genome browser
AA seq
70 aa
AA seq
DB search
MVNATKGLFISCDIPMAQFIINLNASLPASQKFIIHVIDSTHLFVQPHVSEMIRSAIADF
RDQNSYEKPN
NT seq
213 nt
NT seq
+upstream
nt +downstream
nt
atggtcaatgccactaaaggattgttcatatcctgtgacatacccatggcgcaattcatt
atcaatttgaatgcttctttacctgcttcgcagaagttcattattcatgttattgatagc
actcacctctttgtacaaccgcatgtttctgaaatgatacgtagtgctattgctgatttt
agagaccagaattcctatgagaagcctaattga
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