Methanoregula sp. SKADARSKE-2: METHP_00773
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Entry
METHP_00773 CDS
T09978
Name
(GenBank) Peptide chain release factor subunit 1
KO
K03265
peptide chain release factor subunit 1
Organism
mesk
Methanoregula sp. SKADARSKE-2
Brite
KEGG Orthology (KO) [BR:
mesk00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
METHP_00773
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mesk03019
]
METHP_00773
03012 Translation factors [BR:
mesk03012
]
METHP_00773
Messenger RNA biogenesis [BR:
mesk03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
METHP_00773
Translation factors [BR:
mesk03012
]
Eukaryotic type
Release factors
METHP_00773
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
HypA
DUF6125
DNA_ligase_ZBD
DUF7481
Zn_ribbon_RPB9
Motif
Other DBs
NCBI-ProteinID:
WML67268
LinkDB
All DBs
Position
663293..664564
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AA seq
423 aa
AA seq
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MTEEVEMDDARKRYEFKKTLEKLESGEGSGTELITLYIPPDKQIYDVTNQLKDEFGQCAN
IKSKQTRTNVQSAISSILSRLKYYKRPPANGIAVFCGTVQLYGDRTYLQCTIIEPPEPLN
LYMYRCSSKFELEPLMQMLEEKYVYGLLVLDKREAYWGFLRGNRIEPMGGANSTVPGKMR
KGGQSAARFGRLREIAIDEFYTKIGERASAIYLAEKDFFERFKGVLIGGPSPTKEEFEKG
NYLHHEVQKRIIGLFDVAYTNEDGLAELVDAAKDALKGMTVIEEKEFMDRFLKELVKDAG
VAAYGEESIRKNLEIGAVDTLLLSASLRKSRLRMKCQSCGYTEEKTVTIPPGKTVRDIPL
GNCPKCSAPLVLEEEVDIIDELAKIADQSSAKVELISDDFEEGSILYTAFGGIAAILRYR
TGY
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgacagaagaagtcgagatggacgacgcgcgaaagcgttacgaattcaagaaaaccctc
gaaaaactcgagtcgggagaggggagcggaaccgagcttatcaccctgtacattccgccc
gacaagcagatctacgatgtaacaaaccagctcaaggacgagttcgggcagtgcgcaaac
atcaagagcaagcagacgcggacgaacgttcagagcgccatctcctcgatcctctcgcgc
ctcaaatattacaagaggcccccggcaaacggcatcgcggtcttctgtggaaccgtacag
ctctacggcgaccgtacctatctccagtgcaccatcatcgaaccgccggagccgctcaac
ctctacatgtaccggtgcagttcgaagttcgaactcgagcccctgatgcagatgctcgaa
gagaagtacgtgtacggcctgcttgtcctcgacaagcgcgaagcgtactggggcttcttg
cgcggtaaccggatcgaaccgatgggtggggcgaactcgaccgtaccgggcaagatgcgg
aaaggcggccagtcagcggcccggttcggccggctccgggagatcgccatcgacgagttt
tacacgaagatcggtgaaagggcgagcgccatctatctcgccgagaaggacttcttcgaa
cggttcaagggggtcctgataggtggcccgagcccgaccaaggaggagtttgagaaaggc
aattacctccaccacgaggttcagaaacgcatcatcggcctcttcgatgttgcctatacc
aatgaggacgggcttgcagagctcgtcgatgcggcaaaagatgcactcaaggggatgacc
gtcatcgaggagaaggagttcatggaccggttcctgaaagaactggtcaaggacgccggt
gttgcagcatacggggaggagagcatccggaagaacctggagatcggggccgtcgatacc
ctcctcctctcggcaagcctccgcaagtcccggctccggatgaagtgccagagctgcggg
tacacggaagagaagaccgtgacgatcccgccggggaagacggtccgggacatcccactc
gggaactgcccgaagtgctcagccccgctcgtgctcgaagaagaggtcgatatcatcgat
gaactcgcaaagattgcagaccagagcagcgcgaaggtggagcttatctccgacgatttc
gaagagggatcgatcctctatacagcgtttggcgggatcgcggcgatcctccgctacagg
acgggatactga
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