Mesorhizobium sp. 8: FGU64_01220
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Entry
FGU64_01220 CDS
T07809
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
mesr
Mesorhizobium sp. 8
Pathway
mesr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mesr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FGU64_01220 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mesr03021
]
FGU64_01220 (rpoB)
03400 DNA repair and recombination proteins [BR:
mesr03400
]
FGU64_01220 (rpoB)
Enzymes [BR:
mesr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FGU64_01220 (rpoB)
Transcription machinery [BR:
mesr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FGU64_01220 (rpoB)
DNA repair and recombination proteins [BR:
mesr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FGU64_01220 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_2
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
QDB99138
UniProt:
A0A5B8B357
LinkDB
All DBs
Position
233958..238094
Genome browser
AA seq
1378 aa
AA seq
DB search
MAQTQTFNGRRRVRKFFGKIPEVAEMPNLIEVQKASYDQFLMVDEPKGGRADEGLQAVFK
SVFPISDFSGSSMLEFVKYEFEAPKFDVDECRQRDLTYAAPLKVTLRLIVFDIDEDTGAK
SIKDIKEQDVYMGDMPLMTLNGTFIVNGTERVIVSQMHRSPGVFFDHDKGKSHSSGKLLF
AARVIPYRGSWLDIEFDSKDVVHARIDRRRKIPVTSLLMALGMDGEEILSTFYDKITYKR
AGDHWRIPFNVERFKGLKAVGDLVDADTGEVVVEAGKKITARQAKQLGEKGLKAIKATDE
DLLGNYLAEDIVNYATGEIFLEAGDEIDDKTLKVLLSTGEDEIQILDIDHVNVGAYIRNT
LAVDKNESRQDALFDIYRVMRPGEPPTLETAEAMFNSLFFDSERYDLSAVGRVKMNMRLE
LDAEDTVRVLRKEDILAVVKTLVELRDGKGEIDDIDNLGNRRVRSVGELMENQYRVGLLR
MERAIKERMSSIEIDTVMPQDLINAKPAAAAVREFFGSSQLSQFMDQTNPLSEVSHKRRL
SALGAGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINNLATFARVNKYGFIESP
YRKIVDGKLTDEVIYLSAMEEAKHYVAQANADLDKDGRFVDEFVICRSAGEVMMAPRENV
DLMDVSPKQMVSVAAALIPFLENDDANRALMGSNMQRQAVPLVRAEAPFVGTGMEPIVAR
DSGAAIGARRGGVVDQVDATRIVIRATEDLDPGKSGVDIYRLMKFQRSNQNTCINQRPLV
KVGDRIEKGDIIADGPSTDLGDLALGRNVLVAFMPWNGYNYEDSILLSERIVADDVFTSI
HIEEFEVMARDTKLGPEEITRDIPNVSEEALKNLDEAGIVYIGAEVQPGDILVGKITPKG
ESPMTPEEKLLRAIFGEKASDVRDTSMRMPPGTFGTIVEVRVFNRHGVEKDERAMAIERE
EIERLAKDRDDEQAILDRNVYARLSDMLAGKEAIAGPKGFKKGTALSKELLTDYPRSQWW
QFAVENEKLQSELEALRGQYDDSKKALEQRFMDKVEKVQRGDEMPPGVMKMVKVFVAVKR
KMQPGDKMAGRHGNKGVVSRIVPVEDMPFLEDGTHADIVLNPLGVPSRMNVGQILETHLG
WACAGMGRKIGDLLDAYNAGGDIKPLRATIEQVIPANDRNEPVRDYDDESIVRLGEQMRR
GVSIATPVFDGAHEANINEMLEQAGLHSSGQSQLYDGRTGEPFDRKVTMGYIYMLKLHHL
VDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDV
AGRTKVYEAIVRGDDTFEAGIPESFNVLVKEMRSLGLNVELENTKVDEAPVHLPDAAE
NT seq
4137 nt
NT seq
+upstream
nt +downstream
nt
atggcccagacccagactttcaatggccgcagacgcgtacgcaagttcttcgggaagatc
ccggaagttgcggagatgccgaacctcatcgaggtgcagaaggcatcctacgaccagttc
ctcatggtggacgagccgaagggcggccgtgccgacgagggcttgcaggccgttttcaag
tcggtcttcccgatttccgatttttccggttcctcgatgctcgaattcgtcaagtacgag
ttcgaggcgccgaagttcgacgttgacgagtgccgtcagcgcgacctgacctatgcggct
ccgctgaaggtgacgctgcgcctgatcgtattcgatatcgacgaggatacgggcgccaag
tccatcaaggacatcaaggagcaggacgtctacatgggcgacatgccgctgatgacgctg
aacggcacgttcatcgtcaacggcaccgagcgcgtcatcgtttcccagatgcaccgttcg
ccgggcgtcttcttcgaccacgacaagggcaagtcgcactcgtcgggcaagcttctgttt
gccgcgcgcgtcatcccctatcgcggttcgtggctcgacattgagttcgactccaaggac
gtcgtgcatgcccgcatcgaccgccgccgcaagattccggtgacgtcgctcctgatggcg
ctcggcatggacggcgaggagatcctgtcgaccttctacgacaagatcacctacaagcgt
gccggcgaccactggcgcattcccttcaacgtcgagcgcttcaagggcctcaaggccgtc
ggcgatctggtcgatgccgacaccggcgaggttgtcgtcgaggccggcaagaagatcacc
gcgcgccaggccaagcagctgggcgagaagggcctgaaggccatcaaggcgaccgacgag
gacctgctcggcaactacctggccgaggacatcgtcaactacgccaccggcgagatcttc
ctcgaggccggcgacgagatcgacgacaagacgctgaaggtcctgctgtcgaccggcgag
gacgagatccagatcctcgacatcgaccacgtcaacgtcggcgcctacatccgcaacacg
ctggccgtcgacaagaacgagtcgcgtcaggacgcgctgttcgacatctaccgcgtcatg
cgtccgggcgagccgccgacgctggagacggccgaagccatgttcaactcgctgttcttc
gacagcgagcgctatgacctgtcggctgtcggccgcgtcaagatgaacatgcgcctcgag
ctcgacgccgaggacaccgtgcgcgtactgcgcaaggaggacatccttgccgtggtcaag
acgctggtcgagctgcgcgacggcaagggcgagatcgacgacatcgacaatctcggcaac
cgccgcgtgcgttcggtcggcgagctgatggagaaccagtaccgcgtcggcctgctgcgc
atggagcgcgccatcaaggagcgcatgtcgtcgatcgagatcgacaccgtcatgccgcag
gacctgatcaacgccaagccggcggctgccgccgtgcgcgagttcttcggttcctcgcag
ctgtcgcagttcatggaccagaccaacccgctgtcggaagtgtcgcacaagcgccgcctc
tcggcgctcggcgccggcggtctgacccgcgagcgcgccggcttcgaggtgcgcgacgtg
cacccgacgcactacggccgcatctgcccgatcgagacgccggaaggcccgaacatcggc
ctcatcaacaacttggcgaccttcgcgcgcgtcaacaagtacggcttcatcgagagcccg
taccgcaagatcgtcgacggcaagctgaccgacgaggtgatctacctttccgccatggaa
gaggccaagcactacgtcgcgcaggccaacgccgatctcgacaaggacggccgcttcgtc
gacgagttcgtcatctgccgtagtgccggcgaggtgatgatggcgccgcgcgagaacgtc
gacctgatggacgtgtcgcccaagcagatggtgtctgtggccgccgcgctcatcccgttc
ctcgagaacgacgacgccaaccgcgcgctgatgggttccaacatgcagcgtcaggccgtg
ccactggtgcgcgccgaggcgccgttcgtcggcaccggcatggagccgatcgtcgcccgt
gactccggcgccgccatcggcgcccgtcgcggcggcgtggtcgaccaggtggacgccacc
cgtatcgtcatccgcgccacggaagacctcgatcccggcaagtccggcgtcgacatctac
cggctgatgaagttccagcgttcgaatcagaacacctgcatcaaccagcgcccgctggtg
aaggtgggcgaccgcatcgagaagggcgacatcatcgccgacggtccctcgaccgatctc
ggcgatctggcgctcggccgtaacgtgctcgtcgccttcatgccgtggaacggctacaac
tacgaggactccatccttctgtccgagcgcatcgtcgccgacgacgtcttcacctcgatc
cacatcgaggagttcgaggtcatggcgcgcgacaccaagctcggcccggaggagatcacg
cgcgacattccgaacgtctcggaagaagcgctgaagaacctcgacgaggccggcatcgtc
tatatcggcgcggaagtgcagccgggcgacatcctggtcggcaagatcacgccgaagggc
gaaagcccgatgacgccggaagaaaagcttctgcgcgccatcttcggcgagaaggcgtcc
gacgtgcgcgacacctccatgcgcatgcctccgggcaccttcggcaccatcgtggaagtg
cgcgtcttcaatcgccacggcgtggagaaggacgagcgcgccatggccatcgagcgcgag
gagatcgagcgcctggccaaggaccgcgacgacgagcaggcgatcctggaccgcaacgtc
tatgcccgcctgtccgacatgctggccggcaaggaagcgatcgccgggccgaagggcttc
aagaagggcaccgcgctctcgaaggagctgctgaccgactatccgcgttcgcagtggtgg
cagttcgccgtggagaacgagaagctccagagcgagttggaagcccttcgcggccagtac
gacgactccaagaaggcgctcgagcagcgcttcatggacaaggtcgagaaggtgcagcgc
ggcgacgaaatgcctccgggcgtcatgaagatggtcaaggtcttcgtcgcggtgaagcgc
aagatgcagcccggcgacaagatggccggccgtcacggcaacaagggcgtggtttcgcgc
atcgttccggtcgaggacatgccgttcctcgaggacggcacgcatgccgacatcgtgctc
aacccgctcggcgtgccttcgcgcatgaacgtcggccagatcctggagacgcatctgggc
tgggcctgcgccggcatgggcaggaagatcggcgaccttctcgatgcctataacgcgggc
ggcgacatcaagccgcttcgggcgaccatcgagcaggtcattccggccaacgaccgcaac
gagccggtacgcgactacgacgacgagtccatcgttcgcctcggcgagcagatgcggcgc
ggcgtttccatcgccaccccggtgttcgacggcgcgcatgaagccaacatcaacgagatg
ctggaacaggcgggcctgcattcgtccggccagtcgcagctttatgacggccgcaccggc
gagccgttcgaccgcaaggtgacgatgggctacatctacatgctcaagcttcaccacctc
gtggacgacaagatccacgcgcgttcgatcggcccgtactcgctcgtcacccagcagccg
ctgggcggcaaggcgcagttcggcggccagcgcttcggcgagatggaggtctgggcgctg
gaagcctacggcgccgcctacacgctgcaggagatgctgacggtgaagtcggacgacgtc
gccggccgcaccaaggtctacgaggcgatcgtgcgcggcgacgacacgttcgaggcgggc
attcccgagagcttcaacgttctcgtcaaggaaatgcgctcgctcggcctcaacgtcgag
ctggagaacaccaaggtcgacgaggctccggtgcatctgccggacgctgccgagtaa
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