Methylobacterium sp. 4-46: M446_5420
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Entry
M446_5420 CDS
T00679
Name
(GenBank) phage SPO1 DNA polymerase-related protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
met
Methylobacterium sp. 4-46
Pathway
met03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
met00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
M446_5420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
met03400
]
M446_5420
Enzymes [BR:
met01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
M446_5420
DNA repair and recombination proteins [BR:
met03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
M446_5420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Trypan_PARP
Motif
Other DBs
NCBI-ProteinID:
ACA19736
LinkDB
All DBs
Position
complement(5952681..5953583)
Genome browser
AA seq
300 aa
AA seq
DB search
MTDDRDLLAYLDFHVAAGVDAALDEAPHDRFAESASRGRPASESRPAPESRPAPEPRPTP
ESRPTPEPRPAAEPVPAPAAAPRPPARASTFGRSAAAEPGEAAGDARELARTAATLEELE
QLLARFESCPLRFTAKNLVFADGEPTARVMFVGEAPGADEDRVGKPFMGRSGQLLDRMMA
AIGLDRTNAYVGNVVPWRPPGNRNPTPQEIATCKPFIERQIALADPDILVCLGGVATQTL
AATKDGILKSRGRWFPYRTERREIRLLATLHPAYLLRQPLQKRLAWRDFRVLRAALDARA
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgacggacgaccgcgacctcctcgcctacctggatttccacgtcgcggcgggcgtcgac
gcggcgctggacgaggcgccgcacgaccgcttcgcggagagcgcctcccgcggccggccg
gcctccgagtctcgcccggcgcccgagtctcgtccggcccccgagcctcgtccgaccccc
gagtctcgtccgacccccgagcctcgcccggcggccgagcccgtcccggcgccggccgcc
gcgccgcgcccgcccgcccgggccagcaccttcggccgctcggccgcggccgagcccggg
gaggcggccggggacgcccgggagctcgcccgcacggccgccaccctggaggagctggag
cagctgctcgcccgcttcgagagctgcccgctgcgcttcacggccaagaacctcgtcttc
gcggacggggagcccaccgcgcgggtgatgttcgtcggcgaggcgcccggggccgacgag
gaccgggtcggcaagcccttcatggggcgctcgggccagctcctcgaccggatgatggcg
gcgatcgggctcgaccgcacgaacgcctatgtgggcaacgtcgtgccctggcgcccgccg
ggcaaccgcaacccgaccccgcaggagatcgccacctgcaagcccttcatcgagcggcag
atcgccctggccgacccggacatcctggtctgcctgggcggcgtggcgacccagacgctc
gccgccaccaaggacgggatcctcaagtcccgcgggcgctggttcccctaccgcacggag
cggcgcgagatccggctgctcgcgacgctgcacccggcctacctgctgcgccagcccctg
cagaagcgcctcgcctggcgcgacttccgggtcctgcgcgccgcgctcgacgcccgggcc
taa
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