Methylobacterium sp. AMS5: Y590_09305
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Entry
Y590_09305 CDS
T04283
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
meta
Methylobacterium sp. AMS5
Pathway
meta03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
meta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Y590_09305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
meta03400
]
Y590_09305
Enzymes [BR:
meta01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
Y590_09305
DNA repair and recombination proteins [BR:
meta03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Y590_09305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
AMB45094
LinkDB
All DBs
Position
complement(1986805..1987599)
Genome browser
AA seq
264 aa
AA seq
DB search
MRITTWNVNSIKQRVGHLLGFLDEAKPDVVCLQELKCQDASFPREEIEAAGYAVETLGQK
AYNGVALLVRAPLQYTQLLRGLPGDAEDEQARYIEALVHGEGVAPVRVASIYLPNGNPAP
GPKYSYKLAFMARLRAHARALMTTEEALVLAGDFNVIPEPEDAADPAAWTQDALFLPETR
RAFRALLAEGFTDGLRACEPSAGLYTFWDYQAGCWPRNQGIRIDHLLLSPQAADRLVSAS
VQRHLRGLEKPSDHVPVTVELSDG
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgcggatcaccacctggaacgtcaattcgatcaagcagcgggtcggccacctgctgggc
ttcctcgacgaggccaagcccgacgtggtctgcctgcaggagctgaaatgccaggacgcg
tccttcccccgcgaggagatcgaggcggcgggctacgcggtcgagacgctggggcagaag
gcctataacggcgtcgccctgctggtgcgcgcgccgctccagtacacgcagctgctgcgc
ggcctgccgggcgacgcggaggacgagcaggcgcgctacatcgaggcgctggtgcacggc
gagggcgtggcgccggtgcgggtcgcctcgatctacctgccgaacggcaacccggctccg
gggccgaaatacagctacaagctcgccttcatggcccgcctgcgggcgcatgcccgcgcc
ctgatgacgaccgaggaggcgctggtgctggcgggcgacttcaacgtcattcccgagccc
gaggatgccgccgaccccgccgcctggacgcaggacgcgctgttcctgcccgagacccgc
cgcgccttccgcgcgctgctggcggaaggctttacggatggcctgcgggcctgcgagccg
agcgcggggctctacaccttctgggactatcaggccggctgctggccgcgaaaccaaggc
atccgcatcgaccacctgctgctctcgccgcaagccgccgaccgcctcgtctcggcctcg
gtccagcgccacctgcgcgggctggagaagccctcggaccacgtgccggtgacggtggag
ctgagcgacgggtga
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