Methanobacterium sp. MB1: MBMB1_1923
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Entry
MBMB1_1923 CDS
T02957
Symbol
pcn
Name
(GenBank) DNA polymerase sliding clamp
KO
K04802
proliferating cell nuclear antigen
Organism
meth
Methanobacterium sp. MB1
Pathway
meth03030
DNA replication
meth03410
Base excision repair
meth03420
Nucleotide excision repair
meth03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
meth00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MBMB1_1923 (pcn)
03410 Base excision repair
MBMB1_1923 (pcn)
03420 Nucleotide excision repair
MBMB1_1923 (pcn)
03430 Mismatch repair
MBMB1_1923 (pcn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
meth03032
]
MBMB1_1923 (pcn)
03400 DNA repair and recombination proteins [BR:
meth03400
]
MBMB1_1923 (pcn)
DNA replication proteins [BR:
meth03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
MBMB1_1923 (pcn)
DNA repair and recombination proteins [BR:
meth03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
MBMB1_1923 (pcn)
MMR (mismatch excision repair)
Other MMR factors
MBMB1_1923 (pcn)
TLS (translesion DNA synthesis) factors
Other TLS factors
MBMB1_1923 (pcn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PCNA_N
Rad9
PCNA_C
Rad1
Hus1
Motif
Other DBs
NCBI-ProteinID:
CDG65998
UniProt:
U6EF29
LinkDB
All DBs
Position
complement(1866119..1866853)
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AA seq
244 aa
AA seq
DB search
MFKAVLSDSNILKTSFDAISSIVDEVQMMADEEGLRLDALDRSHITFVHLELKKGIFDEY
QCDETMKINVDTEELMKVLKRAKADDMVELTVDEGNLIVTFEGEAKRKFKIRLIDIEYEA
PSPPELEYPTEFEVPFSLLKDSIQDIGIVSDKIYLQVNEEKFQASAEGEFGDAKVEYVHG
ERIEESARSIFSLEKVKEMLKADKFSESAVIRLGNDMPLNLALKMASDEGELSFLLAPRL
ESEE
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaggcagttttaagtgattccaatattttgaagaccagttttgatgccatatca
tccattgttgatgaagtgcagatgatggctgatgaagaaggattacgtctggatgctctg
gaccgcagccacattacattcgttcacctggaacttaagaaaggaatatttgatgaatac
cagtgtgacgaaaccatgaaaatcaacgtggatactgaagaactaatgaaagttcttaaa
agggccaaagccgatgacatggtagaacttactgtggatgaaggtaatcttatagtaaca
tttgagggtgaagccaagagaaaattcaaaatacgccttattgacatagaatatgaggca
cctagccctccagaattagaatatcccactgaatttgaagtgccattctccctccttaag
gactccattcaggacataggtattgtctctgataaaatatatctccaagtgaatgaggaa
aaattccaagcttcagcagaaggagagtttggggatgctaaagtggaatatgtccatggg
gaaaggatagaagaatcggccagatcaatattttccctagaaaaagtaaaagaaatgtta
aaagcagataaattctcagaatctgcggttatcagattaggaaatgacatgcccctgaat
cttgccctgaaaatggcttctgatgaaggtgaactgagtttcctacttgccccaaggcta
gaaagtgaggaatag
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