Methanobacterium sp. MB1: MBMB1_2014
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Entry
MBMB1_2014 CDS
T02957
Name
(GenBank) putative N-glycosylase/DNA lyase
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
meth
Methanobacterium sp. MB1
Pathway
meth03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
meth00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MBMB1_2014
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
meth03400
]
MBMB1_2014
Enzymes [BR:
meth01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MBMB1_2014
DNA repair and recombination proteins [BR:
meth03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MBMB1_2014
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
OGG_N
HHH
AlkA_N
Motif
Other DBs
NCBI-ProteinID:
CDG66088
UniProt:
U6EF63
LinkDB
All DBs
Position
1964845..1965819
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AA seq
324 aa
AA seq
DB search
MKTQFNLRPKGPINLALTINSGQTSQPPWKESNQYFQELVMVNDAPCLVKIGHEDSDPDS
SVNIKVESPEKIPRKAIESKIRDIFGLDHDLDQLYDFLGEDPKLKPTIAFCQGLRIFKAH
NLFECIISSISSANCSILRWTRSVNDIKRRWGDGYRFSSGDFYTFPSPTILSRAPEHDLE
EMQRWEDNLPPDFVFDKNLKACGVGYRAKYIINASRMVQSEINLEKLARMKYEKAFDTIL
QLPGVGPKVADCILLYGLGMGEAFPVDVWIKRIIEHLYFPGKELKPEEVREFGMERYGNW
AGYVQLYLFHYARKSGLLESLKKK
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacccagtttaacctccgtcctaaaggacctattaacttagcccttaccattaac
agtggccagactagccagcctccctggaaagagagtaatcagtatttccaggaattggta
atggtgaatgatgctccctgtctggtgaagattggccatgaagattcagatccagatagt
agtgtgaatatcaaagttgaatctccagaaaagattccaagaaaagccattgaaagtaaa
atcagggatatttttggtcttgaccatgatctggaccagttatacgattttttaggtgaa
gaccctaaactgaaaccaaccattgccttctgccagggcctcagaatctttaaagcccat
aacttatttgaatgtattatatcttccatctcttcagctaactgttccatattacgctgg
acacgttcggtgaatgatattaaaaggaggtggggtgatggatatcggttcagctccggt
gatttttacaccttcccctcacctactatactatcacgcgctcctgaacatgacctagag
gagatgcaacgctgggaagataacctgcccccggattttgtctttgacaaaaatctcaag
gcttgcggtgttggataccgggctaaatacattattaatgcttcacgtatggtgcaatca
gaaataaacttggaaaaactggccagaatgaagtacgaaaaggcatttgatactatcctt
cagttacctggtgtggggcctaaagtggccgactgtatcctgctctatggtttagggatg
ggtgaagctttccctgtagatgtgtggattaaaaggattattgaacatctatacttccct
ggtaaggaattaaaaccagaagaagtacgtgaatttggcatggaacgttatggtaactgg
gcaggatatgttcaactctatttattccattatgcccggaaatctgggcttttagaatca
ttaaagaaaaaatga
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