Methylomonas sp. LW13: U737_07895
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Entry
U737_07895 CDS
T05879
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
metl
Methylomonas sp. LW13
Pathway
metl02024
Quorum sensing
metl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
metl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
U737_07895
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
U737_07895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
metl03019
]
U737_07895
03036 Chromosome and associated proteins [BR:
metl03036
]
U737_07895
Messenger RNA biogenesis [BR:
metl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
U737_07895
Chromosome and associated proteins [BR:
metl03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
U737_07895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
QBC26832
LinkDB
All DBs
Position
1735801..1736043
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AA seq
80 aa
AA seq
DB search
MSKAQNLQDNFLNALRKEHTPVSIFLVNGIKLQGRVDSFDQYVVMLKNTVNQMVYKHAIS
TIVPGKNVTMHRDPDVSDES
NT seq
243 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaagcacaaaacttgcaggacaactttttgaatgccctcagaaaagaacacacc
cccgtgtcgatttttttggttaacggtatcaaactgcaaggccgcgtcgattctttcgac
caatacgtggtgatgctgaaaaacactgtgaatcagatggtttacaagcatgccatatcc
actatcgttcccggcaaaaatgtcacgatgcaccgtgatcccgacgttagcgacgaaagc
taa
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