KEGG   Methylomonas sp. LW13: U737_07895
Entry
U737_07895        CDS       T05879                                 
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
metl  Methylomonas sp. LW13
Pathway
metl02024  Quorum sensing
metl03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:metl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    U737_07895
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    U737_07895
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:metl03019]
    U737_07895
   03036 Chromosome and associated proteins [BR:metl03036]
    U737_07895
Messenger RNA biogenesis [BR:metl03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     U737_07895
Chromosome and associated proteins [BR:metl03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    U737_07895
SSDB
Motif
Pfam: Hfq LSM Hfq_1
Other DBs
NCBI-ProteinID: QBC26832
LinkDB
Position
1735801..1736043
AA seq 80 aa
MSKAQNLQDNFLNALRKEHTPVSIFLVNGIKLQGRVDSFDQYVVMLKNTVNQMVYKHAIS
TIVPGKNVTMHRDPDVSDES
NT seq 243 nt   +upstreamnt  +downstreamnt
atgtcgaaagcacaaaacttgcaggacaactttttgaatgccctcagaaaagaacacacc
cccgtgtcgatttttttggttaacggtatcaaactgcaaggccgcgtcgattctttcgac
caatacgtggtgatgctgaaaaacactgtgaatcagatggtttacaagcatgccatatcc
actatcgttcccggcaaaaatgtcacgatgcaccgtgatcccgacgttagcgacgaaagc
taa

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