KEGG   Methylomonas sp. LW13: U737_22130
Entry
U737_22130        CDS       T05879                                 
Name
(GenBank) RNA polymerase sigma factor FliA
  KO
K02405  RNA polymerase sigma factor FliA
Organism
metl  Methylomonas sp. LW13
Pathway
metl02020  Two-component system
metl02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:metl00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    U737_22130
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    U737_22130
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:metl03021]
    U737_22130
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:metl02035]
    U737_22130
Transcription machinery [BR:metl03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     U737_22130
Bacterial motility proteins [BR:metl02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    U737_22130
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r3 Sigma70_r4_2 HTH_23 HTH_38 UPF0122 HTH_28
Other DBs
NCBI-ProteinID: QBC29396
LinkDB
Position
complement(4822152..4822898)
AA seq 248 aa
MSGAAMYAAVQAGNVDALVIQHAPLVKRIAYHLMGRLPDTVQLDDLIQSGMLGLLEALKH
YDAGQGASFDTYAGIRIRGAMLDELRRSDWTPRSVHKKARMVAEAIREVENQLGRDAKDT
EVAGHMGIDLTEYHHILQDAVSCKTFSVEELVQGEDSVIDDVHGNQQPEDVLIQQNFQKA
LAKAISELPERERLVISLYYDEELNLREIGKVLDVSESRVSQICSQAMLRLRARLADWVE
GKDNEKCS
NT seq 747 nt   +upstreamnt  +downstreamnt
atgagtggagcggcaatgtatgctgctgtgcaggctggaaatgttgatgccttagtcatt
cagcatgcgccgctggtaaaacgcattgcctaccacttaatgggacgactgcccgatacg
gtgcagctcgatgatttgattcaatccggcatgctgggcttgctggaagcgctgaaacat
tatgatgctgggcagggtgccagtttcgatacctatgccggtatccggattcgcggggcc
atgttggacgaactgcgccgttcggattggacgccgcgttcggtgcataagaaagcccgg
atggtggcggaggcgatacgcgaggttgagaatcaactgggacgtgatgccaaggatacc
gaagtggccggacatatgggtatcgatctgactgaataccatcatattttgcaggacgcg
gtgtcttgtaagacctttagcgtcgaagaattggtgcaaggcgaagacagtgttatagat
gatgtgcacggcaatcagcagccggaagatgtgctgatccaacagaattttcaaaaagcc
ctagccaaggccatctcggaattaccggaacgggagcgcttagtcatatcgctgtattac
gacgaagagctgaatttgcgtgagataggcaaggtgcttgatgtcagcgaatcgcgggtt
agccaaatttgtagtcaggcgatgttgcgcttacgcgctagacttgcggattgggtggaa
gggaaagataatgaaaagtgcagctaa

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