Methylomonas sp. LW13: U737_22130
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Entry
U737_22130 CDS
T05879
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
metl
Methylomonas sp. LW13
Pathway
metl02020
Two-component system
metl02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
metl00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
U737_22130
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
U737_22130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
metl03021
]
U737_22130
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
metl02035
]
U737_22130
Transcription machinery [BR:
metl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
U737_22130
Bacterial motility proteins [BR:
metl02035
]
Flagellar system
Flagellar assembly proteins
Stator
U737_22130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_38
UPF0122
HTH_28
Motif
Other DBs
NCBI-ProteinID:
QBC29396
LinkDB
All DBs
Position
complement(4822152..4822898)
Genome browser
AA seq
248 aa
AA seq
DB search
MSGAAMYAAVQAGNVDALVIQHAPLVKRIAYHLMGRLPDTVQLDDLIQSGMLGLLEALKH
YDAGQGASFDTYAGIRIRGAMLDELRRSDWTPRSVHKKARMVAEAIREVENQLGRDAKDT
EVAGHMGIDLTEYHHILQDAVSCKTFSVEELVQGEDSVIDDVHGNQQPEDVLIQQNFQKA
LAKAISELPERERLVISLYYDEELNLREIGKVLDVSESRVSQICSQAMLRLRARLADWVE
GKDNEKCS
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgagtggagcggcaatgtatgctgctgtgcaggctggaaatgttgatgccttagtcatt
cagcatgcgccgctggtaaaacgcattgcctaccacttaatgggacgactgcccgatacg
gtgcagctcgatgatttgattcaatccggcatgctgggcttgctggaagcgctgaaacat
tatgatgctgggcagggtgccagtttcgatacctatgccggtatccggattcgcggggcc
atgttggacgaactgcgccgttcggattggacgccgcgttcggtgcataagaaagcccgg
atggtggcggaggcgatacgcgaggttgagaatcaactgggacgtgatgccaaggatacc
gaagtggccggacatatgggtatcgatctgactgaataccatcatattttgcaggacgcg
gtgtcttgtaagacctttagcgtcgaagaattggtgcaaggcgaagacagtgttatagat
gatgtgcacggcaatcagcagccggaagatgtgctgatccaacagaattttcaaaaagcc
ctagccaaggccatctcggaattaccggaacgggagcgcttagtcatatcgctgtattac
gacgaagagctgaatttgcgtgagataggcaaggtgcttgatgtcagcgaatcgcgggtt
agccaaatttgtagtcaggcgatgttgcgcttacgcgctagacttgcggattgggtggaa
gggaaagataatgaaaagtgcagctaa
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integrated database retrieval system