Methanosarcina sp. MTP4: MSMTP_2028
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Entry
MSMTP_2028 CDS
T03850
Name
(GenBank) tRNA pseudouridine 55 synthase Archaea
KO
K07583
tRNA pseudouridine synthase 10 [EC:
5.4.99.25
]
Organism
metm
Methanosarcina sp. MTP4
Brite
KEGG Orthology (KO) [BR:
metm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
metm03016
]
MSMTP_2028
Enzymes [BR:
metm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
MSMTP_2028
Transfer RNA biogenesis [BR:
metm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MSMTP_2028
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pus10_C
Pus10_THUMP_arc
THUMP
YGR130C_N
Motif
Other DBs
NCBI-ProteinID:
AKB25497
LinkDB
All DBs
Position
complement(2675885..2677180)
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AA seq
431 aa
AA seq
DB search
MDVLEISKKILQEGPVCDHCMGRQFAKLSTGLSNMERGQAVKLTLALEGDRVYKTENDDT
LLRELASCSAYARKTLGIEGEDEQCCVCLDLFRKLDTWADEAVRQLEGIDYSTFLVGTKV
SGLLSENEEILWAETGTSYAEQLKTEVNREVGKLISGKVGKDVDFQNPDIVITLDLTKEE
LELQVRSVYVYGRYRKMVRGIPQTRWPCRKCRGKGCEICDFTGKQYPESVDELIKDPVVE
AFLAVDTAFHGSGREDIDALMLGSGRPFVVEAKSPKKRSADLEELMAEINEQAAGKVEVR
DLKFVAKGMIETLKNSKADKAYKLKVTFKEPVSEEKLKSCLETLSGTEIAQQTPTRVAHR
RADLIRKRRVHEMELKELTDSGYAFITVHCEGGLYVKELVSGDEGRTNPSLSGLLGFPAH
VEELDVINVDI
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggatgtactggaaatttcaaaaaagatacttcaggaaggccctgtctgtgaccactgc
atgggccgccagtttgcaaaattatccacaggcctcagcaatatggagcggggtcaggct
gttaagctgacccttgccctggaaggggaccgtgtctataaaactgaaaacgacgacacc
cttctcagggaacttgcttcctgcagtgcttacgcaagaaagacgcttggaatcgaaggc
gaggatgagcagtgttgtgtctgccttgacctgttccggaaactggacacctgggccgat
gaagcggtcaggcagcttgaaggcattgattattccactttcctcgtgggtacgaaggtg
agcgggcttctgagtgaaaacgaagaaatcctctgggcagagacagggacctcttatgcc
gagcagctgaagaccgaagtcaacagggaggttgggaagctgatctctggaaaggtagga
aaggacgttgatttccaaaacccggacatagtgattacccttgaccttacaaaggaggag
ctggagcttcaggtcaggtctgtctatgtctacggcaggtacaggaaaatggtccgcggc
atcccacagacccgctggccctgccggaaatgtcggggaaaaggctgcgagatctgcgat
ttcacgggcaagcagtaccccgaatccgtggacgaactgatcaaggaccctgtggtggaa
gctttcctggctgtggatacggctttccacggttcgggcagggaggatatcgacgccctg
atgctcgggagcggaaggccttttgtggtggaagcaaaatccccgaaaaaacgctcggca
gaccttgaggaactgatggcggagattaacgagcaggcagcaggaaaagtcgaggtaagg
gacctgaaattcgttgcaaagggcatgattgaaaccctgaaaaactcaaaggcggataaa
gcttataagcttaaagttacatttaaagagcctgtttcagaggaaaagcttaaatcctgc
ctcgaaactctaagtggcactgagatagcccagcaaacccccacgcgtgttgcgcaccga
agggccgatctgatccggaaaaggcgcgtgcatgaaatggaacttaaagagcttaccgat
tccggctatgcttttatcacggtgcactgcgaaggcgggctctacgtgaaagagctggtc
tcaggggacgagggcaggacaaacccaagcctcagcgggcttttaggattccctgcgcat
gtggaagagcttgacgtaatcaacgtcgatatctga
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