Methylorubrum sp. GM97: MSPGM_14020
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Entry
MSPGM_14020 CDS
T10720
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
metq Methylorubrum sp. GM97
Pathway
metq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
metq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MSPGM_14020 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
metq03400
]
MSPGM_14020 (ung)
Enzymes [BR:
metq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
MSPGM_14020 (ung)
DNA repair and recombination proteins [BR:
metq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MSPGM_14020 (ung)
Prokaryotic type
MSPGM_14020 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BDL38812
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All DBs
Position
1544303..1545007
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AA seq
234 aa
AA seq
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MTGPVEAALAAFRASGSPWLDLPFFREGAADRVAKKVDARVASGATVLPEPAAIFRALTL
TPLPAVKAVILGQDPYPTPGDANGLAFSYVGPRRLPASLKVILAELAPEGEKPDLSTGDL
TPWAERGVLLLNAALTTEAGKSGAHLRFGWSQLTDEAVEAVSARDAPAVFLLWGAQARAR
EALIDTSRHGVIASGHPSPLNRARDFPGSRPFDRANAWLEAQGRAPIDWRLGEG
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
gtgaccggacccgtcgaggccgcacttgccgccttccgcgccagcggctccccctggctc
gacctgcccttcttccgagagggggcggcggatcgggtcgcgaaaaaggtcgatgcgcgc
gtcgcatccggggcgacagtgctgccggagcccgctgcgatcttccgggcgctgacgctg
acgcccctgcccgccgtgaaggcggtgatcctcggccaggatccctaccccacgccgggc
gacgccaacgggctcgccttctcctatgtcggcccgcgccgcctgccggcctcgctcaag
gtgatcctggccgaactcgctcccgagggggaaaagcccgacctctcgaccggcgacctc
acgccctgggcggagcgcggggtgctgcttctgaacgcggcgctcacgacggaggccggc
aagtccggcgcgcatctgcggttcggctggtcgcagctcaccgacgaggcggtggaagcc
gtctccgcccgcgacgcgccggcggtgttcctgctctggggcgcccaggcccgcgcccgc
gaggcgctgatcgacaccagccgccacggcgtcatcgcctcgggccacccctccccgctc
aaccgcgcccgcgactttccgggctcgcggccgttcgaccgggcgaatgcgtggctcgaa
gcgcagggccgcgcgccgatcgactggcggctgggtgagggctga
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